Salvia miltiorrhiza (redroot sage): 131020239
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Entry
131020239 CDS
T09291
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
smil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131020239
09124 Replication and repair
03420 Nucleotide excision repair
131020239
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smil01001
]
131020239
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131020239
03019 Messenger RNA biogenesis [BR:
smil03019
]
131020239
03400 DNA repair and recombination proteins [BR:
smil03400
]
131020239
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
131020239
2.7.11.23 [RNA-polymerase]-subunit kinase
131020239
Protein kinases [BR:
smil01001
]
Serine/threonine kinases: CMGC group
CDK family
131020239
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131020239
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
131020239
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131020239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
131020239
NCBI-ProteinID:
XP_057804928
LinkDB
All DBs
Position
4:50075879..50081582
Genome browser
AA seq
423 aa
AA seq
DB search
MADMDQLLTKKVADRYLKREVLGEGTYGVVYKAIDTKTGQVVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSPADIKSYIQ
MTLKGLSFCHKKWVLHRDMKPNNLLIGPGGQLKLADFGLARIFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQWSD
MVYLPDYVEYQHVPGQPMRTLFPMASDDCLDLLGKMFMYDPKARISAQQALEHRYFSSIP
PPTEPALLPRPPPKKEPVNPKVSDFNPLDGPTVLSPPRKQRRVMPHREGFDVNAHNMIKM
DDHGNETRQAAGERSEHAPMSLDFSVFGMRPPNRPTINSADRSHLKKKLDLEFQLPEEEE
EEE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatggatcagttgttgaccaagaaagtagccgatcgttatctgaagcgcgaa
gttcttggtgaaggtacatacggtgtcgtttacaaagccatcgatactaagactgggcaa
gttgttgctatcaagaaaattcgtttggggaagcagaaggaaggtgtcaattttacagct
ttaagggaaattaagttgctcaaagagctcaaggatcctaatatcatcgagttgattgat
gcattccctcacaaggggaacttgcaccttgtgtttgagtttatggagacagatcttgaa
gctgttattcgtgatagaaatattgttctttctccagctgacatcaagtcgtacatccag
atgacactgaaggggctttctttttgccataaaaaatgggtcctgcacagggacatgaaa
ccgaacaacttgctgatcggacctggtgggcaacttaaacttgcagattttgggttagct
cgtatattcgggagccctgatcgaaggttcacacatcaggtttttgctagatggtacaga
gctcccgagcttctgtttggtgccaaacaatatggtccgggggtggatgtatgggctgca
gcatgtatatttgctgagctgcttttacgtcgaccttttctgcagggaaacagtgatatc
gatcaactgggaaagatctttgcagcttttgggacgccaaagccatcacaatggtcagat
atggtctatcttccagattatgtggaatatcagcatgtgcctggtcaaccaatgcgcacg
ttgtttcccatggccagtgatgattgtttggaccttttagggaaaatgttcatgtatgat
cctaaagcgagaatttcagcacaacaagctctggagcataggtacttttcttccatacct
ccacctacagaacctgctttgcttccaagacctccaccaaagaaggaacctgtcaatcca
aaggtctcagactttaatcctctggatggaccaacagtgttgtctcctcctagaaaacaa
agaagagtcatgcctcatcgtgagggctttgatgtcaatgctcacaatatgatcaagatg
gatgaccatggcaatgagacaaggcaggcggctggggagaggagtgagcacgctccaatg
tctttggatttttcagtttttggcatgaggccgccaaatagaccaactattaacagtgct
gacagatctcatctaaagaagaaactggatcttgaatttcaactacctgaagaagaagaa
gaagaagaataa
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