Salvia miltiorrhiza (redroot sage): 131020260
Help
Entry
131020260 CDS
T09291
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131020260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131020260
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131020260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
131020260
NCBI-ProteinID:
XP_057804951
LinkDB
All DBs
Position
4:complement(50212442..50219328)
Genome browser
AA seq
946 aa
AA seq
DB search
MADNFEDHNKLPELKLDAKQAQGFLSFFKKLHTDPRAIRFFDRKDYYTTHGENATFIAKT
YYHTTTAVRQLGSGSDAISSVSVSKNMFETVARDLLLERTDHTLELYEGNGANWRLVKSG
SPGNLGSFEEILFANNEMQDSPAIVAVISNLRESGCTVGLGYVDLTKRVLGLAEFPDDSH
YTNLESTLVALGCKECLLPADIAKSSEFKSLTDALSRCGVMVMERKKGEFKGRDLVQDLG
RLVKGSIDPVRDLLAAFEFAPGALGCIMSYADLLADETNYGNYKIQRYDLDSYMRLDSAA
MRALNVMESKSDANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLDVDEINFRLNLVQAF
VEDAALRQDLRQHLKRISDIERLTRSLEKKKASLVHVVKLYQSSIRLPFIKNALEQYNGQ
FASLIKERYLDPLDKWTDDQHLNKFIGLVEASVDLDQLENGEYMISSGYDSQLLTLKNEQ
ESLEHQIHDLHITAANDLDLALDKALKLEKGTQYGYAFRITKKEEPKVRKKLNVHFIVLE
TRKDGVKFTNTKLKKLSDQYQKVVDEYKTCQRELVARVVQTAASFSEVSILCNLDGLAWS
LSEMDVLLSFADLAAVSPTAYTRPIITPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLV
RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDNASISIRDCIFARVGAGDCQ
LRGVSTFMQEMLETASILKGATERSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIQAPT
LFATHFHELTALAPESTSNEQSSKKLPGISNYHVSAHIDSSSRKLTMLYKVEAGACDQSF
GIHVAEFANFPESVVALARAKASELEDFSPAAILPSDPKEVGSKRKRVEDSDDVTKGSER
ARQFLKDFSELPLDKMELEQALQQVSKLKEGLEKDAVNSCWLQQFL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaattttgaggaccacaacaagcttcccgaactcaaactcgatgccaaacaa
gctcaagggtttctctcattcttcaaaaagctacacactgacccacgagccattcgattc
ttcgatcgcaaggactactatactacgcatggcgagaatgcaaccttcattgccaagacc
tattaccacactacaactgctgtgcgccaactaggaagtggctcggatgccatttctagt
gttagcgtaagcaagaatatgtttgagaccgtggcccgagaccttcttctggagaggact
gatcacactcttgaactgtatgagggcaacggagcaaattggagacttgtgaaaagtgga
agccctggaaatttaggcagtttcgaagagattctgtttgccaataatgaaatgcaggac
tctccagcaattgtggctgtcatttcaaatttacgtgaaagtggatgtactgtagggttg
ggctatgttgatcttactaaaagagtacttggattggctgagttccctgatgatagccac
tatacaaatttggagtcaactcttgttgctcttggctgtaaagaatgccttttgcctgca
gacattgcaaaatctagtgaatttaaatcattaactgatgcattgtccaggtgtggtgta
atggtgatggaaagaaaaaaaggtgagtttaaagggagggatttggtacaagatcttggt
aggcttgtgaaaggctccatagatccagtaagagatctgcttgctgcatttgaatttgca
cctggtgctcttgggtgtataatgtcttatgcagatctacttgcagatgagaccaattat
ggtaactacaagatccaaaggtacgatcttgatagttacatgagattagattccgctgca
atgagggcactaaatgtcatggagagcaaatctgatgctaacaaaaactttagcttattt
ggtcttttgaatagaacctgtactgcaggaatgggcaagcgcctgctgcacatgtggctg
aaacagcccttattagatgtagatgagataaactttaggcttaatttggtacaagctttt
gtggaggatgctgccctacgccaagatctgaggcagcacttgaaacggatttcagatata
gagcgacttacgcgctcccttgagaagaaaaaagctagtctagttcatgttgttaagctt
tatcagtctagcatcagacttccattcattaaaaatgcactggaacagtacaatggccaa
tttgcttcattgattaaggaaaggtacttggatcctcttgacaaatggaccgatgatcag
catttgaacaaattcattggtcttgtggaagcttccgtcgaccttgatcaacttgaaaat
ggagaatacatgatttcatcagggtatgattcacagttattgactttgaaaaacgagcaa
gaatcactggaacatcagatacatgatttgcacataacagccgctaatgatcttgatctg
gctcttgataaagctttgaaattagagaaagggacacaatatggatatgcttttaggatt
accaaaaaggaggagccaaaagtaaggaaaaagctcaatgtgcactttattgttcttgaa
actcgcaaggatggggtgaagttcacaaacacaaagctaaagaaactaagtgaccaatat
cagaaggtggttgacgaatataaaacttgccagagagaattggttgcacgagtagtccaa
actgctgcaagtttttcagaggtatctattttgtgtaacttggatggattagcttggtcg
ctctctgaaatggatgttttacttagttttgccgatttggctgccgtctcccccaccgct
tacactcgaccgatcatcactccatcagatgagggagatattattttagaagggagtcgg
catccttgtgttgaagctcaagactgggtgaactttatcccaaatgattgtaaacttgtg
agggggaaaagctggttccagattatcacaggacctaatatgggtggaaaatcaacattc
atacgacaggttggtgtgaatattctaatggcacaagttggttctttcgtcccatgtgac
aatgctagcatttctatacgcgactgcatttttgctcgtgtgggtgctggtgactgccag
ctacgtggggtttcaactttcatgcaagaaatgctagagacggcatcaatcttgaaagga
gcaactgagaggtcgttaatcatcattgatgagctaggtcgtggcacatcaacatatgat
ggatttggcctagcttgggcaatttgtgagcatatagttgaagtgatacaagcacctacg
ctatttgcaactcacttccatgagctaactgccttagctcctgaaagtactagcaacgag
caatcttccaagaaacttccaggaatatctaattatcatgtgagcgcacacattgactcg
tcaagtcgcaaacttacgatgctttataaggttgaagcaggagcctgtgatcaaagtttt
ggcatacatgttgcagaattcgccaactttccagaaagcgttgttgcccttgcccgagct
aaggcttctgaattagaagatttttcaccagcagcaattttaccttctgatcccaaagag
gttggatccaaacggaagcgagtagaggactctgatgatgttactaagggctctgaacgg
gctcgccagttcttgaaggacttctccgagttaccactagacaagatggagttggaacaa
gcactacaacaagttagcaaattgaaagaaggcctagaaaaggatgcagttaacagctgc
tggctccagcagttcctctag
DBGET
integrated database retrieval system
