Salvia miltiorrhiza (redroot sage): 131020458
Help
Entry
131020458 CDS
T09291
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131020458
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smil01007
]
131020458
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
131020458
03029 Mitochondrial biogenesis [BR:
smil03029
]
131020458
Enzymes [BR:
smil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
131020458
Amino acid related enzymes [BR:
smil01007
]
Aminoacyl-tRNA synthetase
Class II (A)
131020458
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131020458
Prokaryotic type
Other AARSs
131020458
Mitochondrial biogenesis [BR:
smil03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
131020458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
131020458
NCBI-ProteinID:
XP_057805254
LinkDB
All DBs
Position
4:52291285..52298097
Genome browser
AA seq
661 aa
AA seq
DB search
MSALLRSFPAVAKSSLPLLLHTIPKLNPSKLLHRRVYSSIYASTSSSETLSVASTKPPPH
SAAETNANTLEWVRRTDFCGELGEPDLGKRVRVCGWVALHRIHGGLTFVTLRDHTGIVQV
TTLPDDFPEAHAVVNDLRLEYVISVEGVVRQRPIESINKKMKTGFIEVAAEHVQVLNAVR
LKLPFLVTTADEAKESAKEEIRLRYRYLDLRRPHMNSNIMLRHKVVKLIRRYLEDVHGFV
EIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRD
EDLRADRQPEFTQLDMEMAFTPLEDMLKLNEDLIRKVFLEIKGVELPSPFPRITYAEATS
RFGSDRPDMRFELELKDVSEAFRNSSFKVFADTLLSDGIIKAICIPSGSQKYSNSALKKG
DIYNEAIKSGAKGLPFLKVSSDGGLEGIPALVSSLGKTEQDLLLKILSASPGDLILFAVG
NNASVNKTLDRLRLYVAHELGLIDHSRHSILWVTDFPMFEWNDSEERLEALHHPFTAPHP
EDMNDLASARALAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISSEQAENKFGYLLEA
LDMGAPPHGGIAFGLDRLVMLLGGANSIREVIAFPKTSTAGCALTRAPSAVDSQQLKDLA
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccttctccgctccttccccgccgtggcaaagtcctcccttcctctcctacta
cacaccatcccaaaattgaatccctccaaacttctccataggcgcgtctactcatccata
tatgcttccacttcctcttcggaaactcttagtgttgccagcaccaaaccgcccccgcat
tccgctgctgagaccaacgccaacactctggaatgggtcagacgcaccgatttctgcggt
gaattgggggaaccggacttaggcaaacgggttcgcgtctgtggctgggtggcgctccac
cgtattcatggcggtcttacattcgttacccttcgtgaccataccggaatcgtgcaggtt
actactcttccagatgatttcccggaggctcatgcagttgtcaatgatttgaggcttgag
tatgtgatttcagtggaaggagttgtccggcagcgcccaattgagtctataaataaaaag
atgaagacgggcttcatagaggttgcagctgagcatgtccaagtgttgaatgcagtgaga
ttaaaattgccttttttggttactactgctgatgaggcaaaagagtctgccaaagaggaa
atcagattgagataccgatatctagacctacggcgacctcacatgaattccaatataatg
ttgcggcataaagtagttaaactcattcgacgataccttgaggatgtccatggttttgtc
gagattgagactccaattctgtctagatctactccagaaggtgcgagggattatttagtg
ccttcaagagttcagcctggaacattttatgctttgccacaaagtccacaactcttcaaa
cagatgctaatggtctctggttttgataaatactatcaaatagcaagatgtttcagagat
gaggatctaagagcagataggcagcctgaatttacgcagcttgacatggaaatggcattc
actcctctggaggatatgctgaaactgaatgaagatttgattagaaaggtttttctggag
atcaaaggagtcgaactaccaagccctttcccaaggataacctatgctgaagctacaagc
agatttggttcagacaggccagatatgcgttttgagcttgaactgaaagatgtatcagaa
gcgttcaggaattcttccttcaaggtttttgcagataccttgttgagcgatggcatcatt
aaagcaatatgcattccttcaggaagccagaagtattcgaatagtgctcttaaaaagggt
gatatttataatgaagctattaaatcgggagcaaagggactgccgttcttaaaggtctca
agtgatggtgggcttgaaggaattcccgcactggtatcaagtttgggcaagactgaacag
gatctcttactgaagatactatctgctagtcctggtgatctcattctgtttgctgtaggt
aacaatgcatcagttaataaaaccttggaccgacttaggctgtacgttgcacatgagttg
ggattgattgatcattcaaggcactcgatcctctgggtaactgattttccaatgttcgag
tggaatgattctgaggaaaggcttgaggccttgcatcatcctttcacagctcctcatcct
gaggacatgaatgaccttgcatctgcccgagccttagcatatgacatggtttacaatggg
gtcgagattggtgggggaagcttgagaatttacaagcgtgaagtccaacagaaggttttg
gaaatagttggcatttcttctgaacaggctgaaaacaagtttgggtatctcttagaggct
ctggacatgggtgctcctcctcatggaggaattgctttcgggttggatagactggtgatg
ctattgggtggagctaattccatcagggaggttatagcttttcccaagacgtctactgcc
ggatgtgccctcactcgcgcaccctctgctgtcgattcccagcagctcaaggatctggct
ttgtag
DBGET
integrated database retrieval system
