Salvia miltiorrhiza (redroot sage): 131020464
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Entry
131020464 CDS
T09291
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131020464
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131020464
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131020464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
AF_0924
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
131020464
NCBI-ProteinID:
XP_057805266
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All DBs
Position
1:complement(32778863..32782118)
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AA seq
418 aa
AA seq
DB search
MLYLWVSLCCISYFMGFFAAAGNVVMIAKNVTLSFDDIEANFAPSVRESGICGTVSIAEP
LDACSLLTNERVASKNGTRYPFVLIVRGGCSFEDKVRRAQAAGFEAAIVYDNETSDLVAS
SKPIVFGHLPRVNKVAGNPVGININAVFVSKVSGETLAKYAGASDLQLWIVPSYENPSWS
IIALSFISLLGVSAVLATCFFVRRHRFRSERPLAPRVREFHGISSRLVKAMPSLIFTAVL
EDNCTSQTCAICLEDYSVGEKLRVLPCRHKFHAVCVDTWLTSWRTFCPVCKRDAKTKTTK
PLADESTPLLSASVIPSLTSSPSSPASSSPLQIGPSTHQSRSVSLHQHIPSVVYNLHSHH
QSPQSDTPPLQPDGACAVSSNSTSYTSLSTLNSIYVLPYVPAAGNVSSTYLGSSSHAS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatttgtgggtatctttgtgctgcatttcctatttcatgggttttttcgccgct
gctggaaatgtggttatgattgcaaagaatgtgactttgtctttcgacgacattgaagct
aactttgcaccctcagtgagagagtctggcatatgtgggacggtgagcattgcagaacct
ttggatgcttgctcgttgctgaccaatgaaagagttgcaagtaagaacggcaccagatat
ccgttcgtgttgatagtcagaggaggatgtagcttcgaggacaaggttagacgagcacaa
gctgctggattcgaagcagccattgtctatgacaatgaaaccagcgatttagttgcgagt
agtaaacctattgtttttggccatcttccacgagttaataaagtggctggaaatcctgtt
ggtataaacataaacgcggtgtttgtttcgaaagtttctggggaaacacttgccaaatat
gctggtgcatctgatttgcagctgtggatagtcccgagctatgagaacccatcgtggtct
ataatagctctttcgttcatttcattactcggtgtgtcagctgttttagctacttgtttc
ttcgtgagaaggcaccggttcagaagtgagaggccgctagcaccccgtgtgagagagttc
catgggataagcagtcgcttggtgaaggcgatgcccagtctgattttcacagctgttctc
gaggacaactgtacttctcagacatgcgcgatatgcctcgaagactacagtgtcggagaa
aagctccgagttcttccatgtcgacacaaattccacgctgtttgtgtcgacacttggcta
acgtcgtggagaacattctgccccgtctgcaagcgtgatgcaaagaccaaaaccactaaa
cctctggctgatgagtctacaccgttgctatcagcttccgttattccatctttgacttca
tcaccatcttcaccggcatcatcgtcacccttgcagatagggccgtcaacgcatcaatcc
cggtcagtttcactgcaccagcacatccctagcgtcgtctataacctgcattctcatcat
caatcaccccagagtgacacgcctccccttcagcccgatggggcttgtgcagtgtcgtct
aactcgaccagctacacatcattgtcgactctcaactccatatacgtcctgccatatgtc
ccggctgcaggtaatgtctcatcaacctacttaggctcttcaagtcatgcgtcgtag
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