Salvia miltiorrhiza (redroot sage): 131020470
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Entry
131020470 CDS
T09291
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00906
Carotenoid biosynthesis
smil01100
Metabolic pathways
smil01110
Biosynthesis of secondary metabolites
Module
smil_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
131020470
Enzymes [BR:
smil01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
131020470
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
131020470
NCBI-ProteinID:
XP_057805274
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Position
4:52325883..52336260
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AA seq
609 aa
AA seq
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MSIVSSGVSFHQSIVSNCKPEALSNRKPRNQRHRNLCLNHLKSLNLSNDGLEFGVSRGKD
EKRGSLFRLKSAVDVGEVVESYGTGERDGCFYDAIVIGSGIGGLVAATQLAVKGAKVLVL
EKYVIPGGSSGFYERDGFKFDVGSSVMFGFSDKGNLNLITQALAAVGCRLQVIPDPTTVH
FHLPNGLSVQVDREYSKFTSELISKFPHEKEGILKFYGVCWKIFNALNSLELKSLEEPIY
LFGQFFKKPLECLTLAYYLPQNAGDIARKYIKDPELLSFIDAECFIVSTVNAMRTPMINA
SMVLCDRHFGGINYPVGGVGEIAKSLAEGLTNQGSEILYKANATSIIIEDGKAVGVKLSD
GKKFYAKTIISNATRWDTFGKLLKKENLPKEEKRFQEAYVKAPSFLSIHMGVKADVLPPD
TDCHHFILEDDWKKLEDTYGSIFLSIPTVLDKSLAPEGNHILHIFTTSSVEDWEGLSRKD
YEEKKERVAREIINRLEKKLFPGLKSSIVFQEVGTPKTHRRYLARDSGTYGPMPRTTPKG
LLGMPFNTTAINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKNPVLDTALLQ
LLGWFRTLA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtcagttctggggtttcttttcatcagtcaattgtaagtaactgcaagcct
gaggcattgagcaaccgaaaacccagaaaccaaagacacagaaatttgtgtttgaaccat
ttgaaatccttgaatttaagtaatgatggcttggaatttggggtcagcaggggcaaggat
gagaaaagaggcagtctttttaggttgaaatcagctgttgatgttggcgaagtggtagag
agttatggtacaggtgagagggatggctgcttctatgatgccattgttataggttccggg
attggggggctggtggcggcgacgcagctggcagtgaaaggcgccaaggttttggtcctg
gagaagtatgtgattcctggaggaagctctgggttttatgagagggatggcttcaaattc
gatgttggatcatcggtcatgtttggtttcagcgataagggaaatttgaatttgatcaca
caagcattagcagccgtgggatgtaggctgcaagtaatacctgatcccaccactgttcat
tttcatttacctaatggactctctgtccaagtagatagagaatatagcaagttcacttca
gaacttatcagtaaattcccccatgagaaagaaggcattctcaaattctatggtgtctgc
tggaagatcttcaatgcactgaactcactggagttgaagtcactggaggagccaatctac
ctttttgggcaattttttaagaagcctcttgaatgcttgactctagcctactatctgccc
caaaatgctggtgacattgctcggaagtatatcaaggatcctgagttgttgtcctttatt
gatgcggagtgtttcatcgtgagtacggttaatgctatgaggacgcctatgatcaatgca
agcatggttttatgcgatagacattttggtggaatcaactatcctgtcggaggagttgga
gaaattgcgaagtcattagcagaggggttgactaatcaggggagtgagatactttataag
gcaaatgcaaccagcattatcatagaagacggaaaagccgtgggggtgaagctatcagat
ggaaagaaattctatgctaaaaccataatttcaaatgccactagatgggataccttcggc
aagctcttgaaaaaagaaaatctacctaaggaagaaaaaaggtttcaggaggcatatgtt
aaagctccgtcttttctttctattcacatgggggttaaagctgatgttttaccacctgac
actgattgtcaccatttcatcctagaggatgattggaaaaaactggaagacacttatgga
agtatatttctgagcattccaactgtccttgataaatcattggctccagaaggaaaccac
attcttcacattttcactacttcttctgttgaggactgggagggtctgtcacgcaaagat
tatgaggaaaagaaagagcgtgtggccagagagataattaataggcttgagaagaaatta
tttcctggacttaagtcatctatagtttttcaggaggtggggacaccaaaaacacacagg
cgatatttggcccgtgatagtggcacttatggtccaatgcctcgcacaactccaaagggc
ttattggggatgcccttcaacacaacggctattaatggtttgtattgtgtgggagatagt
tgctttcctgggcaaggtgtcatagctgtagctttttcaggagttatgtgtgcacatcga
gtggccgctgatttaggatttgagaagaaaaaccctgttcttgataccgctctccttcag
ctacttggttggttcaggactttagcatga
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