Salvia miltiorrhiza (redroot sage): 131020526
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Entry
131020526 CDS
T09291
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131020526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131020526
03009 Ribosome biogenesis [BR:
smil03009
]
131020526
04131 Membrane trafficking [BR:
smil04131
]
131020526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131020526
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131020526
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131020526
Membrane trafficking [BR:
smil04131
]
SNARE
SNARE associated proteins
Others
131020526
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131020526
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131020526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
AAA_28
nSTAND3
Mg_chelatase
AAA_18
Viral_helicase1
Parvo_NS1
ATPase_2
ABC_tran
IstB_IS21
AAA_7
AAA_lid_PRS2_C
NACHT
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
Vps4_C
ResIII
Phage_Mu_Gp48
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
131020526
NCBI-ProteinID:
XP_057805373
LinkDB
All DBs
Position
4:53012083..53016707
Genome browser
AA seq
808 aa
AA seq
DB search
MSNQPESSDPSSAKKDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQIFRGD
TILIKGKKRKDTVCIALAEDTCEQPKIRMNKVVRNNLRVRLGDVVSVHLCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVVETDPSEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRAVKYAIRENIEKDIERERRRGEN
PEAMEEDVEEEVAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGAEFRFAE
QSGAGTAAAAADPFAAASAAADDDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaaccagagtcatccgatcctagtagcgccaagaaagatttcagtactgcg
attttggagaggaagaaggcggcgaatcggttggtggtggatgaggccatcaacgatgat
aattctgtagtttctcttcaccctgataccatggagaagctccagattttccgtggcgac
accatcctgatcaagggtaagaaaagaaaagatactgtctgcatcgcccttgctgaggat
acttgtgagcaaccaaagattcggatgaataaggttgtccgcaacaatctcagagttaga
ctaggagatgtggtttccgtgcacttatgtcctgatgtgaagtatgggaagcgagtccac
attctccctgtggacgacaccattgaaggggttactggaaaccttttcgatgcttacctg
aaaccttatttcctagagtcataccggcctgtgaggaaaggtgatttgtttcttgtgagg
ggtggaatgagaagtgtagagttcaaggtcgttgagactgatccttcagaatactgtgtt
gttgcccctgatacagaaatcttctgtgagggagaacccgtaagaagggaggatgaggat
aggttggatgaagttggttacgatgatgttggtggtgttcgtaaacagatggctcagatt
cgtgagttggtagagctaccgctgaggcacccgcagcttttcaagtcaattggtgtgaag
cctcctaaaggaattctgctatatggtcctcctggatctgggaaaaccttaattgccaga
gctgtggccaacgagactggtgctttcttcttctgtattaatggaccagaaataatgtca
aaaatggcaggagaaagtgaaagcaatctcaggaaggcctttgaagaagctgaaaagaat
gcaccttctattatatttattgatgaaattgactccatagcgcccaagagagagaaaacc
catggagaagtagaaaggagaatcgtatcccaacttctgacattgatggatggactcaag
gctcgtgcccatgttattgtgatgggcgctacaaaccgtcccaatagcatcgaccctgct
ctaagaaggtttgggaggtttgatagggaaatagacataggcgttcctgatgaagtaggg
cgccttgaggtacttcgtatccacacaaagaacatgaaacttgctgaagatgttgatttg
gaaagaattgccaaggatacacatggctatgttggtgccgatttagctgctttgtgcact
gaagctgcccttcaatgcattagggagaagatggatgtcatcgacttggaagatgattcc
attgatgcagagatcctgaactccatggctgtcagtaatgagcacttccagacggctctt
ggaacgagcaacccctctgctctgcgtgaaacggttgttgaagtgcccaatgtcagctgg
gaagacatcggaggccttgagaatgtcaagcgtgagcttcaagagacggttcaatatccg
gttgagcatcccgagaagtttgagaaatttggaatgtcgccctcgaaaggagttcttttc
tatggtcctcctggatgtggaaaaactttgctagccaaggctatcgcgaacgagtgccag
gcaaacttcatcagtgtcaaggggcctgaactgctcactatgtggtttggagagagtgag
gcgaacgtcagagagattttcgacaaggctcgccagtctgctccttgcgtcctatttttt
gatgaactggattccattgctactcagagaggaagcagtgtaggagatgccggtggcgct
gctgatcgtgtgttgaatcaactcctcacagaaatggacggaatgaatgcaaagaagact
gtcttcatcatcggtgcaaccaacaggcccgacatcatcgatccggccctcctccgccct
ggccgtcttgatcaactcatctacatccctcttcctgatgaggaatcgcgctatcaaatc
ttcaagtcgtgcttgaggaagtcgcccgtctccaaagacgtcgacctaagagcccttgct
aagtacactcaaggattcagtggtgctgacattactgagatatgccaacgtgcagtcaag
tatgccatcagagaaaacatcgaaaaagatatcgagagggagaggcgaagaggcgagaac
cccgaggctatggaggaagatgtcgaggaagaggtagcagagatcaaacctgcacacttc
gaagaatcgatgaagtttgctcggaggagcgtgagcgacgccgacatacgcaagtaccag
gcgtttgcgcagaccctgcagcagtcgaggggattcggtgcggagttccggtttgctgag
cagagcggcgccggcaccgccgcagcggccgccgacccttttgcagcagcctcagctgca
gctgatgatgatgacctctacagttaa
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