Salvia miltiorrhiza (redroot sage): 131021009
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Entry
131021009 CDS
T09291
Name
(RefSeq) two-component response regulator ARR2-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131021009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131021009
Transcription factors [BR:
smil03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
131021009
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
131021009
NCBI-ProteinID:
XP_057806063
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Position
4:56148237..56152298
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AA seq
710 aa
AA seq
DB search
MNLGVNSMSLTTSSASWKSGDAVSDQFPAGLRVLVVDDDPTCLRILEKMLRNCRYEVTKC
SRAEVALKLLRDNKDGFDVVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKSVVMK
GVTHGACDYLIKPVRMEALKNIWQHVVRKKKYEWKEKDMEQSGSVEDGGERQQKPSDDAD
YSSSANEGNWRSSRKRKEEEDDGDDKDDSSTLKKPRVVWSVELHQQFVTAVNQLGIDKAV
PKKILELMNVPGLTRENVASHLQKYRLYLRRLSGQPQNGLGNSFLGPQDGGFGSMSSLNG
LDLQALASSGQIPAQSLATIQAAALSRVTNKSGISVPLVDQRNNIFSFDNPNIRFLDGQQ
HHNNGKQVNLLHGIPTNMDSKQLAAMHQSAQPFGNMHMNVHSQSGQSNSLLTQLVQPQSR
TQMLNEVGSNQVLNLPSSVGQPGLSQAIPGSVFSRYGIDNVRAPTYASLSQPSSVVEFSR
SQGIELSGNTIPLSSNSGIPSFTSKGMLQEEVNSEMKGPRGFLPNFDVFNELNQNRTDDW
GLQNVGSSFESPQHSNAQGRLDVAPSVLVQPGFASDHRSGHIRATSVNKAAFSAASSLSN
STSLGQQQQQLTSSHGDNSLRIKTERLPDMGFGSSLFPDQFGQEDLMSALLKQVNYVFHK
SYVIKLMNSIVVRRFLTYSSKKGWCRWKTNLASTNTSWIISRLSLLVHCS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggagtcaattccatgtctttaactacttcaagtgcttcttggaagtccggc
gacgcagtttccgaccaatttccggcggggttgagagttctcgtcgtcgacgatgacccc
acttgtcttaggatcttggaaaagatgctgaggaattgccgctatgaagttaccaaatgc
agtcgagctgaggtcgcgttgaagttacttagggataacaaggatggattcgacgttgtt
attagcgatgtccacatgccggatatggatggttttaagcttttggagcacattgggttg
gagatggatctgccagtcattatgatgtcggctgatgacagcaaaagtgtcgtgatgaag
ggtgtcactcatggtgcttgtgactatctgataaagccggttcggatggaggcattgaag
aacatatggcagcatgtggttcgtaagaagaagtacgagtggaaggagaaggatatggaa
cagtcggggagcgtggaagatggaggagagcggcagcaaaagccttcggacgatgctgat
tactcctcttcagctaacgaagggaattggagaagttcgagaaagaggaaagaggaggag
gatgacggtgatgacaaggatgattcgtctacattgaagaaaccgcgtgttgtttggtct
gttgagctgcaccagcaatttgtgaccgctgttaatcaacttgggatcgacaaggctgtg
ccgaagaaaatcttggaattaatgaatgtcccgggcctcactagagagaacgttgcaagc
caccttcagaaatatcgtctttatcttagaaggcttagtggacaaccccagaatggactc
gggaactcgtttcttggaccccaggatggaggttttggttcgatgagttcgctcaacggc
ctcgatcttcaagctcttgcttcttcgggtcaaatcccagctcaaagccttgcaacgatc
caagctgcagcgcttagtagggtgaccaacaaatccggtatatctgtgccccttgtcgat
caacgcaacaacatcttcagcttcgataatccaaacatcaggtttctagatgggcagcaa
caccataacaatggtaagcaagtgaatctactccacggaatccctactaatatggattcg
aaacagcttgctgctatgcaccagtctgcgcagccctttggcaatatgcacatgaacgtc
cactcgcagtcaggccaaagcaattctttgctcacgcagctggttcaaccgcagtcgagg
acacaaatgttaaacgaagttggcagcaaccaggtcttgaatcttccatcatccgtgggg
caaccaggtttgtctcaggcgatccccggatctgtcttcagccggtatggaattgataat
gttcgtgctccgacatacgcgtctctttcccagccctcgtccgtggtagaattttcaagg
agtcagggcatagagttgtctgggaacacgattccactcagtagtaactcgggaatccca
agcttcacctcgaaagggatgctccaagaagaggtgaactccgaaatgaaaggccctaga
ggctttctgcccaactttgacgtgttcaatgagctcaaccagaacagaaccgacgattgg
ggcctgcagaatgtcggatcgagctttgaatctcctcagcattcgaatgctcaaggccgt
ctggatgttgcaccgtccgttttagttcaaccggggttcgcctctgatcataggagtgga
catatccgggctacatccgttaataaggcagctttctcggctgcctccagccttagcaac
agcacgagcctcgggcagcagcagcagcagctcacgtcatcacatggcgataactctcta
agaatcaagacggaaagactacccgacatgggctttggaagcagcctcttccccgatcag
ttcggccaggaggatctcatgagcgcgcttctcaagcaggtaaactacgtattccacaaa
tcttatgtgataaaattgatgaactctatagtagtaagacggtttcttacttacagcagc
aagaagggctggtgccggtggaaaacgaatttggcttcgacgaataccagctggataatc
tcccggcttagcctgctcgttcactgcagctga
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