Salvia miltiorrhiza (redroot sage): 131021174
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Entry
131021174 CDS
T09291
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131021174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131021174
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131021174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
APG6_N
COG3_N
Prefoldin_2
APP_E2
ATG17_like
V-SNARE
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
131021174
NCBI-ProteinID:
XP_057806247
LinkDB
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Position
4:467964..474356
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AA seq
790 aa
AA seq
DB search
MAGTGFSFGFSSTGSASSAPSFGIASGTTPASAASPSFGVASGASSTPLFGFGSAPTSSS
TPSFGFASNPSSANSFGFGSGTGSSPFGGSSPFGSSSSAAANIFGSTPGGAPTPGIFGSS
SSGTGQTANAFGSAASNPAPTTPPPSSSPFGAQSAFGSPAPGSNLFGSGAPTPSLFGNSS
SSAASASNTGSLFGSGASATPNPFGSTTAGSVASATPNLFGSTTAGSGASSTPSPFGLTT
AASAPAFGSGLALNAGQFGSSTSAPSTPQFGVSSAPAGVFGSSAPASTGGNSTSLFGANS
GSSPGLFGSSNLFGSSSASPFVVAPSTTSSSSASPTSGFSFPTSAFSVSSSAASAPGFSF
PSASASVSAAPGLSLPASSATSAPAFSFNTASGTTSSGISFLKSTTSSASSASATTSLSS
SPGFSFASAPSLSSASASKNQSPLFSTVTTTTTTSASAPSALSVSSASASASPGLTFPSL
TVSAPGTSASAPTSGFTGFGTTSTPASSSGSASSFSLSLKTPGTGASQAQSSVALPSFGV
SAASSTTAVSSSTSSAAQTSSILVAASSSGTAPVTSAAPTSTPKLPSEITGKTVEEIIKE
WNGELQERTGKFRKQANAIAEWDRRILQNRDILLGLESEVAKVVETQGSLERQLELIETH
QDEVDKALQSMEEEAERLYKEERGMLLDDDAASTRDAMYEQAEVIERGLEQMTEQIKSII
NSLNASQGGELEATDGMTPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLASHGSAADR
ELSGPKLWLN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggctggcacaggattctcattcggcttctccagtactggctccgcctcctccgcacct
tccttcggcattgcctccggaaccacaccggcctccgccgcctcaccttcttttggcgtc
gcttccggagcctcatccacacctttatttggttttggctccgcaccgacgtcctcctcc
acaccgtcttttggctttgcctccaaccctagctccgcgaattcgtttggctttgggtcg
ggaaccggctcatctccgttcggcggttcctcgccattcggctcatcctcttcggccgcg
gccaacatttttggatcaactcccggcggagctccgactcctggcattttcggatcctcg
tcttcaggtacaggccaaacagctaacgcattcggttctgcggcttcgaaccccgctcca
acaactcccccgccttcctcatctccgtttggcgcccaatcggcctttggatcccctgcg
cccggatccaaccttttcggctccggtgctccaactcccagtctatttggcaattcttct
tcttccgcagcttctgcgagcaacaccggctcactttttgggtcaggggcgagtgcaaca
cctaacccttttggatcaaccacagctgggtcagtggcgagtgcaacacctaatcttttc
ggatcaaccacagctgggtcaggggcaagttcaacacctagtccttttggattaaccaca
gccgccagtgcaccagcatttgggtcgggcctggccctgaacgcagggcaatttggctcg
tcgacttcagcgccgtccacaccacagtttggggtgagttctgcgcctgcaggcgtattt
ggatcctcagccccagcttctacaggaggcaattctacatccttgtttggggcaaattct
ggttcaagtcctggtctttttggttcttccaacttattcggatcgtcctctgcttcgcca
tttgttgtggcgccgtcaaccacttcttcaagttcagcttcacctacttctggattttcg
tttcccacttcagcattctccgtttcaagttcagctgcttcagcacccgggttctcgttc
cccagtgcttcggcttcagtttctgctgcgcctggactttctcttcccgcatcatcggcc
acgtcggctcctgcattttcatttaatacagcttctggcaccacttcttctggcatttcg
tttttgaagagcaccactagctctgcctcctcagcatcagccacaacgtctctatcttct
tcacctggtttttcatttgcttcggcaccctctctttcaagtgcttcggcctcaaaaaat
cagtcacctctcttttcaactgtcacaactactaccacaaccagtgcttcagctccttcc
gcattaagtgtgtcttctgctagtgccagtgcaagtcctggtttgacgtttccatcattg
accgtgtctgcaccggggaccagtgcatctgctccaacttcagggtttacaggtttcggc
acaactagtacgcctgcatcatcctctggaagcgcaagttctttctcattatctttgaaa
acacccggaactggagcctcacaagcacaatcaagcgtggcgctgccttctttcggtgtt
tcagctgcaagctcaacaacggcagtgagctcaagtaccagttctgctgctcagacatca
tctatccttgttgcagcttccagtagtgggactgctccagtcaccagtgcggcaccaact
tctacaccaaagttaccatctgaaatcactgggaaaacagttgaggagatcattaaagaa
tggaatggggaacttcaggagcgtactgggaagtttaggaaacaagctaatgctatagct
gagtgggatcgcaggattctgcagaatcgtgatattcttcttgggcttgagagtgaagtt
gcaaaagtagttgaaacgcaaggtagtttggagcggcagctggagctaattgaaactcat
caagatgaggttgacaaggccctgcaaagcatggaggaggaagctgagcgactgtataaa
gaggagcgtggaatgcttcttgatgatgatgctgcatcaactagagatgcaatgtacgag
caggctgaagtgatagagcggggattggagcagatgacagaacagatcaagtcgattata
aacagtcttaatgccagtcaaggtggagagcttgaagcaacagacggaatgactcccctt
gatgttgttgttcgcatattaaacaatcagcttagttcgttgatgtggattgatgagaag
gctgaggaattctcttcgcggattcagaagcttgctagccacggctctgccgcagatcgt
gaactgagcggccctaagctgtggttgaactga
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