KEGG   Salvia miltiorrhiza (redroot sage): 131021493
Entry
131021493         CDS       T09291                                 
Name
(RefSeq) uncharacterized protein LOC131021493 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    131021493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smil03400]
    131021493
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     131021493
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F RAWUL ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_Nup120_160 VWA_3_C
Other DBs
NCBI-GeneID: 131021493
NCBI-ProteinID: XP_057806682
LinkDB
Position
4:38009068..38024714
AA seq 776 aa
MMSSAIPAMHRVGSSGNTSNSVRTRKEKRLTYVLNDADDTKHCAGVNCLAVSKSAEQEGS
EYLFTGSRDGTLKRWALSEDSATFSATFESHVDWVNDAVLTGGNTLVSCSSDTTVKVWNC
LSDGVCARTFHQHSDYVTCLAAAEKNSNVFASGGLGGEVFIWDLEASLNPVSKSSDANSD
DCSTSTNGLGSLPSTSLRPINSSNNISVHATQSQGYAPIAAKGHKESVYALATNDRGTLL
VSGGTEKVVRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDLAQQR
CIHSYAVHTDSVWALAATPSFSHVYSGGRDLSLYLTDLATRESVLLCSKEHPILQLELHG
DGIWVSTTDSSVHRWPAEAHNPLKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPSL
TIYGTSAIVQHEILNNRRHVLTKDTAGTVKLWEITKGLVTENYGEVPFEKKKEELFEMVN
VPTWFTVDTRLGSLSVHLDTPQCFSAEMYSADLGIAGKPEDDKVNLARETLKGLLAHWLT
KRRQRFGSQSSANGEIPPGKEMSTRTLTLSRIEGDSNSENDSAVYPPFEFLAASPPSIVT
EGSQGGPWRKKITDLDGTEDEKDFPWWVLDCVLNNRLPPRENTKCSFYLHPCEGSNVQVL
TQGKLSAPRILRIHKVVNYVVEKMLLDKPIDNLNADGTFAPNAPGGQIPHPVVGDGSLRS
GLKPWQKLRPSIEILCNNQVLPPDMSLATVRAYIWKKSEDLILNYRIVQGRSQVVL
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgatgtcttcagccattccagcgatgcatcgcgttggaagttcaggaaacacatccaat
tcagttcgtactcgcaaggaaaagaggttaacatatgtattgaacgatgcagatgataca
aagcattgtgctggcgtaaactgcttggccgtatcgaaatctgcagaacaagaaggaagt
gagtacctcttcactggtagtcgtgatggcacattgaagagatgggcattatcggaagat
tctgctactttttctgctacatttgagtctcatgttgattgggttaacgatgcagttcta
acgggtggtaacactttggtctcttgctcctctgataccactgttaaggtatggaattgc
ttgtctgatggagtatgtgccaggacgtttcatcaacactctgactatgtcacttgcctg
gcagcagcagagaaaaatagcaatgtctttgcctctggaggccttggtggggaagttttc
atatgggatctggaagcttctctgaatcccgtttccaaatcaagtgatgcaaattcagat
gattgttcaactagtactaatggtttgggatctttgccgagtactagtcttcgtcctatc
aactcaagcaataacatatctgtgcacgccacccaatctcaaggctatgctccaattgct
gcaaaaggccataaagagtcagtttatgcgttggcaactaatgaccggggaactcttctt
gtatccggtggaactgagaaggttgtgcgtgtttgggaccccaggacgggctctaagacc
atgaagctaagagggcacacagataatatcagagcgctgttattggattctacaggcaga
tattgtttatctggctcgtctgattctatgatcaggttgtgggatcttgctcaacagcga
tgcattcattcctatgctgtgcacacagactctgtctgggcactagccgctactccatca
tttagtcatgtttatagtggtgggagggacctttctttgtatttaactgatttggcgaca
agagaaagcgtactgctatgttcaaaagaacatcctatactgcaactagaactgcatggt
gatggtatatgggtttccacaacggattcttctgtacatagatggcctgcagaggcgcat
aatccccttaaagtattccaaagaggtggctcatttttagctggtaacttgtctttttca
agggcaagggtttcactggaaggttctacacctgttcctgtttataaagaaccgtctctt
accatttatggaacttcggctatagtgcagcatgagattttaaataatagaagacatgtc
ctgacaaaggacactgctggtacagtaaagttgtgggaaatcacgaagggtttggtcaca
gaaaattatggagaggttccatttgagaagaagaaagaggaattgtttgagatggtgaat
gttccaacatggttcacagtagatacaaggcttgggagtttgtccgtgcacttagacaca
ccacaatgtttttctgctgagatgtactctgctgatctagggattgctgggaaacctgag
gatgacaaggtcaatttggcaagagaaaccctcaaagggctattggcgcattggttgacc
aaaagaaggcagagatttgggtctcaatcttcagctaatggagaaattccaccaggaaag
gaaatgtctacaagaactttaaccctgtctcgaatagaaggagatagtaattcggagaat
gactctgcagtatatccacccttcgaatttttagcagcttcccctccttccattgttact
gaaggctctcagggaggaccctggagaaagaaaattactgacttagatggaactgaagat
gagaaagacttcccttggtgggttcttgattgtgtgctgaataatcgccttcctccaagg
gaaaataccaaatgtagcttctatttgcatccgtgtgaaggttctaatgtgcaggtcctc
acacaagggaaactgagtgctcctcgcattttgagaatacacaaggttgtcaactatgtg
gtagaaaagatgcttcttgacaagccaattgataatctgaatgctgatggaacttttgct
ccgaatgcacctggaggtcagattccacatccagttgtaggagatggttctctccgatct
gggctgaaaccttggcaaaaactcaggccttctatagagattctttgcaataaccaggta
ttacctccagacatgagcttggccactgttcgggcttacatatggaagaaatctgaagac
cttatccttaactacagaattgtgcagggcaggagccaggtagttctatga

DBGET integrated database retrieval system