Salvia miltiorrhiza (redroot sage): 131021508
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Entry
131021508 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131021508 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131021508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131021508
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131021508
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131021508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
131021508
NCBI-ProteinID:
XP_057806706
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Position
4:complement(38263081..38275621)
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AA seq
891 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELENQIDSFEAEIEGLSVKKGKTRPPRLTHLEASITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVTGPPSLVKGVTASSAVITMKTSLAATPVQTSVTTTATIQHVASTLDQVDETAFQD
DAVARTPPPKGSGLSSPVPQTPPAGLATPGITSVVGASSPVAVPSATKEEDITNFPGRKS
SPALAETGLRAIGRGGLPSQPAPNILPSSGNTISGNGALGTIPLSSDMGKRNILGSDDRP
GSSGMVQGLASPLSNRAVMPQASKSSDVLGSSDTGSVNDSTVVGTRVFNSPVVPGMQWRP
GNSFQNQNEPGQFRGRTEIAPDQREKFLQRFQQVQLQGQTNLLGMTPLTGGKQYSAQQQN
LLLQQFNAQSSSISPQLGLGVGVQASGINSATTSASLQPQSSAVHQPTNPQTIISSTPKD
AETVLNKVEEMQQQQSLAEDSSSDSAVNSGLGKNLVAEDELKSPYALDAAAAVASGSLPE
PSQVMREIDLSPGQPLQSASSSGSLGVIGRRSVSDLGAIGDNISASTPNSGGMHDQLYNL
QMLEAAYYRLPQPKDSERAKTYTPRHPAATPPSYPQVQAPIVNNPAFWERLGADTYGTDT
LFFSFYYQQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPKVATDDFEQGTYVYFDFH
IASDEQHGWYGLLLLLFYSFVTLSAHSIVYSFVIVIVIVILFFCYLSLIFH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaagccggaagttgcagggagagatagatcgagttttgaagaaggttcaagaa
ggcgtcgacgtgttcgacagcatttggaacaaggtttatgatacagacaatgcgaatcag
aaggaaaaattcgaggccgacttgaaaaaggagattaagaagttgcagaggtatagagac
cagatcaagacatggatacagtccagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctgatggatgctcgaaaacaaattgagcgtgaaatggagcgatttaagata
tgtgaaaaagaaacaaagacaaaagcattctcaaaagaaggtcttggccaacaacctaag
acggatccgaaggaaaaagctaaatcagagacgagagattggttgaataacgtggttagt
gagctggaaaatcaaattgatagctttgaagctgaaatagaaggactttcggttaagaaa
gggaagacaagaccacccagattgacgcatctggaagcatccatcactcggcataaggct
catattatgaagctggagttaattctaaggctcttggataacgatgaattgagtccggag
caagtcaatgatgtgaaggatttcttggatgactatgttgaaagaaatcaggaagacttt
gatgagtttagtgatgttgatgagctttacagttccttacctctagacaaggtggagtct
cttgaagatctagttacgggtcctcctagtcttgttaagggagtcactgcttccagtgca
gttataactatgaaaacttctctggctgcaacacctgttcaaacttcagtaacaaccaca
gctaccatccaacatgttgcttccaccctcgaccaggttgatgaaacagcttttcaggat
gatgcagttgcaagaaccccacctcctaaaggtagtggcctcagttctcctgtgccacaa
acaccaccagcaggtcttgcaactcctggcatcacaagtgttgttggtgcgtcatctcct
gtggctgtgccaagtgctacaaaagaagaggatattacgaatttccctggtcgtaaatca
tcaccagcacttgctgaaactggattaagggctattggcagaggtgggttgcctagtcaa
ccagctcctaacatccttcctagttctggcaacacgatttccggcaatggagcccttggt
acaattcccttgtcatctgatatggggaaaagaaatatcttgggatctgatgatcgacct
gggagtagtggcatggtgcagggtcttgcatctcctctaagtaatcgagcagtcatgcca
caagcttcgaagtcgagtgatgtgcttggatcatctgatactggaagtgttaatgattct
acagttgtgggcaccagagtcttcaattctcctgttgttcccggtatgcaatggcgacct
ggaaattccttccaaaaccagaatgaaccgggccagtttcgtggaagaactgagattgcg
cctgatcaaagggagaagtttctacaacggtttcagcaggtacagctgcaaggccagact
aatcttctgggtatgacgcctcttactggaggaaagcagtactctgcacaacagcaaaac
cttctcttacaacagttcaatgctcaaagctcatccatctcacctcaacttgggttgggg
gttggagtccaagcttcaggtattaacagtgcaacaacatctgcttcgctgcagccacag
tcaagtgcagtccaccaaccaactaatccgcagacaatcatatcttcaacgcctaaggat
gcagaaactgtccttaacaaagttgaggaaatgcagcagcaacagtctctcgcagaagat
tcttcttcagattctgctgtcaactctgggctaggaaaaaatcttgttgcagaggatgaa
ttgaaatctccttacgctttagatgctgcagccgcagttgcttctggttctcttcctgag
ccttctcaagtgatgcgagagatagatctatctccagggcagcctttacaatcagcttca
tcttctggaagtctcggtgttattggtcgaagaagtgtgtctgaccttggtgctattggg
gataacattagtgcatcaactccaaattctgggggaatgcacgatcagttgtacaatttg
cagatgcttgaggctgcttattatagacttcctcaacccaaggattcagaacgtgctaag
acctatactccaagacatccggctgcaactcctccaagctatcctcaagtacaagcccct
attgttaataatccagccttttgggaacgccttggtgcagatacttatggcactgacacc
ctgttcttttcattttactatcagcagaatacgtatcagcaatacttggctgctagggaa
ctgaaaaaacaatcttggagataccacagaaaatacaacacatggttccaacggcatgag
gagccaaaagttgctacagatgattttgaacaggggacatatgtctactttgacttccat
attgccagtgatgaacaacatggatggtatggactattgttattgttattttactctttt
gttacactatctgctcattctatagtttattcttttgttattgttattgttattgttatt
ttattcttttgttacttgtccctcatctttcattga
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