Salvia miltiorrhiza (redroot sage): 131021689
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Entry
131021689 CDS
T09291
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131021689
03460 Fanconi anemia pathway
131021689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131021689
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131021689
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
AAA_13
Fungal_lectin
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
131021689
NCBI-ProteinID:
XP_057806924
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Position
4:41118286..41164029
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AA seq
611 aa
AA seq
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MSQPIRVDILSDSDSDSEPCGYRRSLRDEAIDLTTPPPFPQSKKKQKTHNFSNPSNSTVF
IIDDDHTPFKSNRQSSPTPSPFSDASLVKCSRGTSSFSVASCFLAEGLATEQLVVAETPI
SELLKSEVAISKCNTRISTAEDARPFITNHNSGEIKGWICVESDDESEDLGEIGALKDNP
STFAAKLADETEFPPRLVESSSFSCATSFQLQRKATQNPVRTHILEGCSTPGTSEDGISE
VNNTCFLKEKKKRDETVKLKRTAKEERHRLMEEKKRLKEQEKLLKAASKAEAAEMKKREK
ELQKWEKGKYALKSIVAEIDKKVVELGSIGGHLLTRFAEKGLSYRITSNPVERTIVWNMA
VPDEISQIAPERIMISYILVVYEAEEFCNLVVNESLMDHIQSVQHRYPHHTICYVTNKLM
AYINKREQAQYKNPANNCGWKRPVVEEVFAKFATHFSKVHSRQCVDEAELAEHVVGLTCS
LANCQFRKRLTRFSVNANGSAIPKDCVDKNLIKKNLWLKALVAIPKVQPRFAMAIWKKYP
TMKSLLRVYMNPTKSVHEKEFLLKDLTTEGLLGDDRRLGEVCSKRIYRILMAQCGNIKTD
DVENGADFFNL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccaattcgcgtcgacattctctccgactccgactccgactccgaaccctgc
ggttatcgacggagtctcagagacgaagccattgacctcactacgccgccgccattcccc
caatctaagaagaaacagaaaacccacaacttttcaaaccctagtaactccaccgtcttc
atcatagacgatgaccacacgccatttaagtcaaataggcaatcctctcccactccttcg
ccattctccgatgcgtccctcgtcaaatgttctagagggacatcctccttttcagtggct
tcgtgtttcctagcagaaggtttagctactgagcaacttgtagttgccgaaactccaatt
tctgaacttttgaaatctgaggttgcgatcagcaagtgcaacacaagaatctccactgcc
gaagatgctcgtccttttattacaaatcacaactctggtgaaatcaagggatggatatgt
gtggagtcagatgatgaatctgaagatcttggcgaaattggagctttgaaggataatcca
agtacttttgctgctaaattggcagatgagacagaatttcccccgagattggtcgagtcc
tcctcattttcttgtgcaacttcctttcaactacaaaggaaagccacacagaacccagtt
agaacgcacatcttagaaggctgttcaactcctggaacatcagaagatggcatatctgag
gttaacaacacatgtttcttgaaagagaaaaagaaaagagatgaaacggtgaaattaaag
aggacagcgaaggaggaaagacatcgtctgatggaagaaaagaaaaggctcaaagaacaa
gagaagttgcttaaagctgcttcaaaggctgaggcagctgagatgaagaaacgggagaag
gaattgcagaaatgggaaaagggtaaatatgctctcaaatccattgttgctgagattgat
aaaaaagtcgttgaactgggatcaattggaggacatcttctcactagatttgctgaaaag
gggctctcatatcggataacttcaaatccagtagaaagaactattgtatggaatatggcc
gttcctgatgaaatttctcagattgctcctgaaagaattatgatctcatatatactagtt
gtatatgaggctgaagagttctgtaaccttgtcgtaaatgagtctctgatggatcatatt
cagagtgttcaacatcgttatcctcatcacactatatgttacgtcacaaataagcttatg
gcttatatcaataaaagggaacaagcacagtacaagaaccctgctaacaactgtggttgg
aagcgacctgttgtagaggaggtcttcgcaaaatttgccacccatttttctaaagtacat
tcaaggcagtgtgttgatgaagctgaattagctgaacacgtggttggtctaacttgcagc
cttgcaaattgccaatttaggaaaagactgacgcggttttcagttaatgcaaatggatct
gctatccctaaagattgtgttgataagaacttaattaagaagaatttgtggctaaaggca
ctggtagctatccctaaggtgcagccacgattcgctatggctatatggaagaaatatccc
acaatgaaatctcttttaagagtttacatgaatccaacaaaatctgttcatgagaaggaa
tttctgctcaaggacttaactacagaaggcttactcggtgatgatagacgactgggtgag
gtttgttcgaagagaatctacagaatccttatggctcaatgcggaaacatcaagacagat
gatgttgagaacggggctgatttctttaatctctaa
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