Salvia miltiorrhiza (redroot sage): 131021732
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Entry
131021732 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131021732
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131021732
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131021732
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131021732
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131021732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
CpXC
Motif
Other DBs
NCBI-GeneID:
131021732
NCBI-ProteinID:
XP_057806992
LinkDB
All DBs
Position
4:41594955..41600347
Genome browser
AA seq
926 aa
AA seq
DB search
MAETATTMISSNGVGRTEPEFDSVALFHRRIEFHQAQKHFNGFVNESSNGFKLVKLNSVK
ASGFAPKNEKSLEHSDVGMDPELSFEITFRRIGAGLRNLGNTCFLNSVLQCLTYTAPLAA
YLQSGKHQNSCRTAGFCALCAIQKHVSRALQSSGRILEPKDLVSNLRCISRSFRNARQED
AHEFMVNLLESMHKCCLPCGVPSESPSAYEKSLVHKIFGGRLRSQVKCMQCSYCSNKFDP
FLDLSLEIQKADSLYKALAHFTAKEQLDGGAREYQCDQCKQKVKASKQLTVHKAPQVLAV
HLKRFSSHSPGQKVDKRVAFEPTLDLKPFVTGPYDGDLKYTLYGVLVHYGWSTHSGHYYC
FVRTSSGMWYSLDDNQVVQVNERKVLEQKAYMLFYVRDRKNVGSKNHVNALQKDNMVMNA
IGNAAYSKLNLELKEKIQNGSDKRKLNGAAALSGRAAPVTALPNEAPSENMSSNINGKLT
AENLDLGRNAKCESMVPPTKAPLKEYSSMELNSSVNGSGGASNGGHVATDTCHNTSGVVE
EQSTNTVLLSDSRPQVSMYKKETSSSIAMPSGCKDSDEDKPCESAEKAPDIAVLSRLSPD
QCKMVGPISEMNASGSRMPTGAIGELGKSIRDEQAPKKAVGPNTEVTVENGRRINVQSKE
PLRLGITKKKRQDLKVKRKLLKYQAVTTSLSSNLILGGGLCLRKKKHKQKLMRKQSSMLK
KSPDTKDMLSENGLPSKLGQSASKESFPQAVVDESTCSREKKAKFVSDGDSSSISGDAID
KDFRKRILLDGSTVSAEKQPDIRQSTAQGAGMSAEHQRELRQNDVMNMLTRGLEETTGKE
HVGRWDDIGVSLSTKYKTRASGAAAQIGYIGDEWDEEYDRGKRKKVRVPVVSFDGPNLFQ
EIANKRSKTKRAKLDRSRDGNQPFRI
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacggcgacgacgatgatcagttcgaatggggtgggcaggactgaaccggag
ttcgattcggtggcgttgttccataggaggattgagttccatcaagctcagaagcatttc
aatggttttgtaaacgagagcagcaatgggtttaagctggtgaagctgaactcggtcaag
gcttccggtttcgcccctaaaaacgaaaaatcattggagcattctgatgtcgggatggat
cctgagctcagcttcgagattacatttcgcagaattggtgcaggtttgcgtaaccttgga
aacacttgtttccttaattcggtactgcaatgcctgacatatactgcaccattagctgcc
tatcttcaaagtggaaagcatcaaaattcttgtcgtactgccgggttttgtgcattatgt
gccatccagaaacatgtcagtcgagctctgcagtcaagcgggaggattctagagcctaag
gatcttgtgtcgaacttgagatgcatatctcggagctttcgcaatgccaggcaagaagat
gctcatgagtttatggtgaatctgctcgaatcaatgcataagtgctgcttaccatgtgga
gtgccaagtgaatctcctagtgcttacgagaaaagcttggtccacaagatatttggtggt
cgattgcgaagtcaggtgaaatgcatgcagtgctcgtactgctctaacaaatttgatcca
ttcttggatctaagtctagaaatacagaaagcagactcattgtacaaggcacttgctcat
ttcaccgccaaagagcagttagatggaggtgccagggaatatcagtgtgatcaatgtaaa
cagaaagtaaaggcttcgaagcagctaacagtacacaaggcacctcaagtactcgctgtt
cacctgaagcgtttcagttcgcattctcctggccaaaaagttgataaaagagttgctttt
gaacctaccttggacttgaaaccttttgtcactggcccctatgatggggatctgaaatac
actctctatggagttcttgttcattatggttggagcactcattccggccattattactgt
tttgttcgcacatcgagtggcatgtggtattcccttgatgacaatcaggttgtccaagtt
aatgagaggaaagttctggaacagaaggcctatatgttgttctatgttcgtgatagaaaa
aacgttggctcgaagaatcatgttaatgcccttcagaaagataacatggtgatgaatgcc
atcggaaatgctgcatattcaaaattgaacttggaattgaaagagaaaatccaaaacggt
tcagataagagaaagttaaatggcgctgcagctttatccgggagggctgcaccggtgact
gctctaccaaatgaggctccttcggaaaatatgtcctcaaacattaatggcaaattgaca
gctgagaatttggaccttggaagaaatgccaagtgtgaatcgatggtgccaccgacaaag
gctccactgaaggaatattcttcgatggaattaaattcaagcgttaatggctctggcggt
gcttcaaatggaggtcatgtcgcaacagatacctgccacaacacgtcgggtgttgtagaa
gagcagagtacaaacacagttttattgtccgacagtaggcctcaagtttcaatgtataag
aaagaaacaagtagctctattgccatgccatcgggctgcaaggatagtgatgaggacaaa
ccttgtgaatcagctgagaaggctcctgacattgctgtgctcagcagattatctccagac
caatgcaaaatggttggccccatttctgaaatgaatgctagcggaagcagaatgccaacg
ggagcaattggtgaactagggaaaagcattcgagacgagcaggcaccaaagaaggctgtc
ggtccaaatactgaggtaactgttgaaaatgggcgaagaatcaatgtgcagtcgaaagag
cctctcagacttgggataactaagaagaaaaggcaagaccttaaagtaaaaaggaagctc
ttgaagtatcaggcagtcaccacatcactcagctctaaccttatattaggtgggggcctc
tgcttacgaaagaaaaagcacaagcagaaactgatgagaaagcaaagttctatgcttaag
aagtctcccgatacgaaggatatgttaagtgagaatgggttaccatcaaagctaggacaa
tcggcatctaaagaatcatttcctcaagctgttgttgacgaatctacttgctctcgggaa
aagaaagccaaatttgtttcagatggtgatagtagtagcatatcaggtgatgctattgat
aaggactttagaaagaggattcttctcgatggctccacagtttctgctgaaaagcaacct
gacataaggcaatcgactgctcaaggagcggggatgtctgcagagcaccaaagagagttg
aggcaaaatgatgtcatgaacatgcttaccaggggcttagaagagacaaccggtaaagaa
cacgttggtcgttgggatgacattggtgtttcactatctactaaatataagacaagagca
tcaggagctgctgcccaaatcggttatattggggatgagtgggatgaggagtacgacaga
ggaaagaggaagaaggtaagggtccctgttgttagcttcgatggaccaaacttattccaa
gaaattgcaaacaaaagatcgaaaacaaagagagcaaagctcgacagatccagagatggg
aaccagccatttaggatatga
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