Salvia miltiorrhiza (redroot sage): 131021788
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Entry
131021788 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131021788
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
smil03015
mRNA surveillance pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131021788
09122 Translation
03013 Nucleocytoplasmic transport
131021788
03015 mRNA surveillance pathway
131021788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131021788
03041 Spliceosome [BR:
smil03041
]
131021788
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131021788
Spliceosome [BR:
smil03041
]
Complex C
Other components
EJC/TREX
131021788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
131021788
NCBI-ProteinID:
XP_057807064
LinkDB
All DBs
Position
4:complement(42237902..42242788)
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AA seq
761 aa
AA seq
DB search
MSSQYVKLGNRSVDQWKVTELKEELKRRKLTTTGLKQDLVRRLDEAVRIEMQSSLEEAEN
ESMQSEVPIEKENAVTNVTEKTEDFTEREVDIVEKVDPNAGHVIDDCIGSSGEVKVIETD
LMQETKSAGLEGGQVPEPPLVETTEVGKIIEPVNTSKASNSQDHGTNEEGDAIILLKDDG
SLQEDVKLELSAPNTQSPQINESRTSLAPLNGQDLQCSQTQNEGIHPTDQRENDDSNCLQ
PDSSGQTLKHQVSEVDPNLGFQVTSDSVSTESVSIIEKNELMIDVINDNVKLELDVKPEM
VQQSPSGAVPDGGESHPMDVEEPLDNNDVKNHLDTKDVEEPLDKNDVKDHLDIKDVEEPH
DKKPHLEDTGGSEVENVDSLKNIDSGDIDPPEKLSLDRSSGDDSMEEDIMESKQMDGKSD
SFTENVDSGTPSLKEEDHVDVVGHDKPVEMKVQPVEIEITNVENETASALTSGKRKFQDK
EAVGSNDVKKMRRWNAESLKSSEPQSGSITPKGSSDPSFKPITGTNSLANVEAPKERVVP
PSSRPPTTSLRIDRFLRPFTLKAVQELLGKTGTVTSFWMDHIKTHCFVSYSSVEEALETR
NAVYNLQWPTNGGRLLVAEFVDPEEVKSHVEAPLASPATPSPSTTPTPTQPPSAAQPSPR
QQLLKQQIPTPLPPPPLSNPPAHVRERLHPPREQPVPARDRLNLPPPPPLPVPLPEKVDP
PIVTLDDLFRKTKATPRIYYLPLSDEVVATKLKTQGKNVTQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacaatatgttaaacttggcaatcgatcagttgatcaatggaaggtcactgag
ctgaaggaagagctcaagagacgtaaattgactactacggggttgaaacaagatctagtg
aggcgtttagatgaagcagttcgtattgaaatgcaaagttccttggaggaagcagaaaat
gaatctatgcaatctgaggttcccattgaaaaagaaaatgctgttacaaatgttactgaa
aaaactgaggattttacggagagagaggttgacattgttgaaaaggtagatccgaatgca
gggcatgtaatagatgactgcattgggtcatcaggtgaagtcaaagtcatcgaaacggac
ttgatgcaggaaaccaagtctgctgggctggaaggagggcaggttcctgagccccctctt
gtggaaactactgaagttggcaagataattgaacctgtaaatacttcgaaagcatcaaac
tcacaagatcatggaacaaatgaggaaggagatgctattatattgcttaaagatgatgga
tccctgcaggaggatgtaaagcttgaactgtctgctcctaatactcagtcacctcagatc
aatgagagcaggacttctttggcgcctcttaatggacaggacttgcagtgtagtcaaact
caaaatgaaggtattcacccaacggatcagagagaaaatgatgattccaattgtctccaa
ccagattccagtggccagacactgaagcatcaggtatctgaggttgaccctaatttaggg
tttcaagtaacatctgattctgtttctactgaatctgtctccattattgagaaaaatgaa
ctaatgatagatgtaattaacgataatgtcaaattagaattagatgttaagcctgagatg
gtgcagcagtcgcccagcggtgccgtccctgatggtggtgaatcacatccaatggatgtt
gaagagccacttgacaataatgatgtgaaaaatcaccttgacacaaaagatgttgaagag
ccacttgacaaaaatgatgtcaaagatcaccttgacataaaagatgttgaagaacctcat
gacaaaaaaccccacctagaagacaccggtggtagcgaggtagaaaatgtcgatagtctc
aagaacattgatagtggtgacatagatccacctgaaaaactaagtttagataggagttct
ggtgatgattccatggaagaggatataatggagagtaagcagatggacggcaagtctgat
tcatttactgaaaatgtggactctggaacacctagtttgaaagaggaggatcacgtggat
gttgttggtcatgataagcctgttgagatgaaggttcaacctgttgaaattgagataact
aatgttgaaaatgagacagcctctgccctgacctccgggaaaagaaaatttcaagacaaa
gaagctgttggcagtaatgatgtaaagaagatgcgcaggtggaatgctgaaagcttaaaa
agttcagaaccacagagtggttctataacaccaaagggttcatctgatcctagttttaag
cccataacggggaccaactctttggctaatgtagaggctcccaaggagcgtgtggttcca
ccttcatcaaggccgccaactacttctcttagaattgatcggtttttgcgcccttttact
ttgaaagccgtccaagaacttctaggaaaaactggaactgttaccagtttctggatggat
cacatcaaaacccactgttttgtctcatactcatctgttgaagaggctttagaaactcgt
aatgctgtatacaatctccagtggcctacaaacgggggacgcctgttggttgcggaattt
gttgatcctgaagaagtcaaatcacacgtggaggctccactagcatcacctgcaactccc
tcgccgagtacaactccaactccaactcaacctccatctgctgcacagccttccccacgg
cagcaattgctgaagcagcagataccaacgcctcttcctccaccaccattgtctaatcct
ccagcccatgtcagggaacggctgcatccaccaagggaacagcctgtcccagcaagggat
aggctaaaccttccacctccacctccacttccagttccactcccggagaaggttgatccg
ccaattgttacgttggacgacttatttcggaaaaccaaggcaacacctcgcatctactac
ctgccgttgtctgatgaagtagttgcaacaaagctgaagacacaggggaagaatgttact
cagtag
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