Salvia miltiorrhiza (redroot sage): 131021958
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Entry
131021958 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131021958
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131021958
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
131021958
NCBI-ProteinID:
XP_057807277
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Position
4:complement(44809461..44816804)
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AA seq
688 aa
AA seq
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MDKGRRRCHLIILLCLFFLLTKIHADRSSPPVKLLVTDKHVEIDNGIVKITLSNPGGMIT
SVGYKKTTNILQYRFKEGRRGYWDIMWSTPDRNGSHLDTLECENLRVIAESDDQVEVSFI
RTWHHSLDGEVPLNIDKRYIVLRGSSGFYSYATLEHMAGWPDLDIDEARIVMKLDEMFRY
MVISDDKQRIMPTEMDTKTGRSLDYKEAVLLTNPSNPQLRGEVDDKYQYSCENKDSHVHG
WISSNPRIGFWVIMPSDEFRAGGPIKQDLTSHASSTSLAVFFSAHYIGADFGVKLRNGER
WKKVFGPVFMYLNSDNTHNPTAIWEDAKRQAAEETKKWPYNFPLSRDFPRSNQRGAISGR
LFVHDRVITTANSAYVGLAQPGDAGSWQDNSKGYQFWTQSDESGHFRIKDVRAGTYNLYA
WVPGVIGDYKHRADIIIRPGSQIVMGNIVYDAPRNGPTLWEIGIPDRTAAEFYVPDPSPH
LVNKLYINHTEKYRQYGLWNRYTDLYPHQDLIYTVGVSDYRRDWFFAHVNRKVSKGYVPT
AWQIVFNVRHVIRAGTYTLRLALASANYAEIQVRINKRSGIRPYFSTGVIGADNAIARHG
IHGLYRLYSVEISGSQLLQGRNTIYLRQARGALPFVGAMYDYIRLEAPPQSSHQSHSTAV
SYANSINSCTSVLIMCITSSISYAILIK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggtcgaagacgctgccatctaattatattattgtgtttattcttccttctt
accaagattcatgcagacaggtcgtcgcctccagtcaagcttctcgtaacggacaaacat
gtggagatagataacggcattgttaaaataacgttatcaaatcccggcggcatgatcaca
agcgtcggatacaaaaagaccaccaatattcttcaatatcgcttcaaagaagggcgaaga
ggttactgggacattatgtggagtacgccagatcgcaatggcagtcacttggacacgctc
gagtgtgagaacttaagagttatagcagaaagtgatgatcaggttgaagtttcattcata
aggacatggcatcactcccttgatggagaagtgcctcttaatattgataagaggtatatt
gtcctacgtggatcttctggtttctactcgtatgcaactttagagcatatggcaggatgg
cctgatctagacatagacgaagcaagaattgtgatgaagcttgatgagatgtttcgttac
atggtaatatctgacgataagcaaaggatcatgccaacagaaatggatacgaaaacaggg
cgtagtcttgactacaaggaggctgttctgttaacaaatcccagcaatccacaactcaga
ggagaggtggatgataagtatcagtactcgtgtgagaacaaggatagccacgtgcacgga
tggattagttctaatccgcgtattgggttttgggtgataatgcctagcgatgagttccga
gctggtggccctatcaaacaagacctcacttcacatgctagctctacttccttagctgta
ttctttagtgcgcattatattggtgcagattttggagttaaattgcgcaatggagagcgg
tggaagaaggtctttggccctgttttcatgtaccttaattccgacaacacccataacccc
acagcaatttgggaagatgctaagagacaagctgcagaagagaccaagaaatggccttat
aatttcccattgtcacgagattttccccgttccaaccaacgtggtgcgatcagtggccga
ctatttgtacacgatagggtaatcacaacagcaaattcagcatatgtaggattggctcaa
cctggagatgctggatcttggcaagacaactctaaggggtatcaattctggacacaaagt
gacgaaagtggacacttcagaatcaaagatgttagagcaggcacttacaacctatacgct
tgggtgccaggagtcataggagactacaaacaccgcgctgacattataattcgaccagga
agccaaattgtgatgggtaatattgtgtacgatgctccaagaaatggtcccactctttgg
gaaatcgggatccctgatcgaactgcagctgaattctacgttcctgatccttcccctcac
ctagttaacaaactatacattaaccacacagaaaagtatagacaatatggtttgtggaac
agatacactgatttatatcctcatcaagatctgatttacaccgttggagtcagcgattat
cgtagagactggtttttcgcccatgtaaataggaaggtgagcaaaggctatgtaccaaca
gcatggcaaattgtgttcaacgtgagacacgtgattagggcaggaacttacacgcttcgg
cttgcattggcatctgccaactacgcagaaatccaagtacggatcaacaagcgcagtggc
attcgcccctatttctcgactggagtgattggcgcagacaatgcaattgctaggcatggc
attcacggcctctatagattatacagtgtggagatatcaggatctcaactgctgcaagga
agaaacacaatatatctgaggcaagcacgaggcgccttgccattcgtaggcgctatgtat
gactacattcgcctcgaagctccgcctcagtcctcgcatcaatcacattcgactgccgtc
tcctatgcaaatagtatcaattcatgcacgtctgtactcatcatgtgtattacttcctcg
atttcatatgctattcttatcaaatag
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