Salvia miltiorrhiza (redroot sage): 131021959
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Entry
131021959 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131021959
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131021959
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
DUF4365
Motif
Other DBs
NCBI-GeneID:
131021959
NCBI-ProteinID:
XP_057807278
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Position
4:complement(44828995..44833853)
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AA seq
668 aa
AA seq
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MQRMARSLPVPPWPLIILCFFFLLAKIHAVRLVPLSNQEKSPPVKLHVTDTHVEIDNGIV
RLTLMNPAGLITSLGYKGVSNILEYRNREGRRGYWDIVWSRPDRNGSHFDTLQCTSLRVI
AESDDQVEVSFTKTWHRSLDREVPLNIDKRYILLRGSSGFYSYAIFEHMEGWPDLNIDEA
RIAFKLHQDMFHYMVISDNKQRIMPSERDRKVGDKLDYKEAVLITHPSNPRLRGEVDDKY
QYSCDNKDNHVHGWISSDNPRIGFWVVMPGDEFRGGGPIKQDLTSHAGTTSLATFFSAHY
AGINYGVRLRNGERWKKVFGPVFMYLNSDPNNNPTAIWEDAKRQTAQETKKWPYDFPLSQ
DFPDANQRGAITGRLLVHDRATAAAKSAYVGLAPPGNVGSWQEDAKGYQFWIKTDERGYF
SIRGVREGTYNLYAWVPGVIGDYKHQADITIRAGNEVGMGDVVYSPPRNGPTLWEIGIPD
RTAAEFYIPDPNPNLVNKLFINHTEKYRQYGLWNRYTDLYPHHDLVYTVGVSDYRRDWFF
AHVNRHVQKEYVPTTWQIVFNARNVMRRGSYTLRLALASSSFAEIEVWINNQINGRGPQF
STGRIGRDNAIARHGIHGLYRLYSVSIWGSELVEGRNTIYLRQARGANPFTGVLYDYIRL
EAPPQPHN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaatggcacgatcgcttccagttccaccatggcctctaataatactatgtttc
ttcttccttcttgctaagatccatgcagtcagattagttccactgagtaatcaagaaaag
tcacctccagtcaagctccatgtaacggacacccatgtggagatagacaacggcattgtt
agactaacactaatgaatccggccgggttgatcacaagcctcggatacaaaggggttagc
aatattcttgagtatcgcaacagagaagggcgaagaggatattgggacattgtgtggagt
aggccagatcgtaatggcagccatttcgacacgctccaatgtacaagcttgagagttata
gcagaaagcgatgatcaggttgaggtttcattcacaaagacatggcatcgctcccttgac
agagaagtgcctctcaatatcgataaaaggtatattctgttgcgtggatcttctggtttc
tactcgtacgcgatttttgagcatatggaaggatggcctgatctcaacatagacgaagca
agaatcgccttcaagcttcaccaagacatgtttcattacatggtaatatcggacaacaag
cagaggatcatgccatcagagagggacagaaaagtgggggataagcttgattacaaggaa
gctgttctgataacacatcctagcaatccaagactgagaggagaggtggatgacaagtat
cagtactcgtgcgacaacaaggataaccacgtgcacggctggatcagctccgataatccg
cgcatcggattctgggtggtgatgcccggtgatgaattccgaggcggcggccctatcaaa
caagacctcacatcacatgccggcacgacttccttagctacgtttttcagtgcgcattat
gctggaatcaactatggagttagattgcgcaatggagagcggtggaagaaggtgtttggc
cctgttttcatgtacctcaactcggatcccaacaataaccccactgccatttgggaggat
gccaagagacagacagcacaagagaccaagaaatggccatatgatttcccactgtcacaa
gatttccccgatgccaatcaacgcggtgcaatcacgggccgactgttggtacacgacaga
gcaaccgcagcagcgaaatcagcatatgtgggattggctccacctggaaatgttggatct
tggcaagaggacgccaagggctatcaattttggataaaaacagatgagaggggctacttc
agtatcagaggtgttagagaaggcacgtacaacttgtacgcatgggtgccgggagtcatc
ggagactacaaacaccaggccgacattacaatccgagcaggaaatgaagttggaatgggc
gatgttgtgtacagtcctccaagaaacggtccaacgctgtgggaaatcgggatccccgat
cgtactgcagctgagttctacattcccgatccaaaccctaatctagtaaacaaattattc
atcaaccacacagaaaagtacaggcaatatggcctgtggaacagatacactgatctgtat
cctcatcatgatctggtttacaccgtcggagtcagcgactatcgtagagactggtttttc
gcgcatgtaaacaggcatgtgcagaaagagtatgtaccaaccacatggcaaattgtgttc
aacgcaagaaatgtgatgaggagaggaagttacacgcttcggctagcattggcatcttcg
agttttgcagaaatagaggtatggatcaacaaccagattaatgggcgtgggcctcagttc
tcgacggggaggattgggagagacaatgcgattgcaaggcacggcattcatggtctgtac
agactgtacagtgtgagtatttggggatctgaattggtggaaggaagaaacacaatatat
ctgaggcaggcaagaggcgctaacccattcaccggtgtgctctatgattacattcgcctc
gaagccccgcctcaacctcacaattag
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