Salvia miltiorrhiza (redroot sage): 131022049
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Entry
131022049 CDS
T09291
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
131022049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131022049
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
131022049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
131022049
NCBI-ProteinID:
XP_057807403
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Position
4:complement(1025818..1030720)
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AA seq
690 aa
AA seq
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MARNKEGLVLVIEVGPSMHGVLPEVEKVCCLLAQKKLIYGKYDEVGVVAFGTTGTKNDLT
VEVGGYENVTVLRDIKVVDGDLVDVLHQLPRGGAPGDFLDAVVVGMDMMIKKYKETNKGK
KRLCLITNAVTPTRNPYEGTKEDQVKTVAAQMMTHGMKMDCVVVRAQKDWDVDKKIVEEN
DFLLGLLSNKSSSKVYVGNATSLLGALRTRNISPVTTYRGDFELSSIMKIKVWVYKKTCE
EKFPTLKKYSDKAPPTDKFASHEIKVDYEYRSIEDPKRVVPPEQRIKGYSYGPQVVPISS
AEWDAVKFKPEKGVRLLGFTDASNIMRHYYMKDVNLLIAEPGNMKAVLAISALARAMKEM
NKVAIVRCVWRQGQTNVVIGVLTPNVSEKDNVPDSFYFNVLPFAEDVREFQFPSFSNLPS
SMQPNKQQQEATDKLVQMLDLAPAGKEEILPPNLTPNPVLERFYRSLELKSKDPSANVPP
IDETLRRITEPDPELLHQNTAVIEEFRRSFELKENPKLKKSSRRIREKPTGSSEEGEGIA
AAGQAMDATEHMSTVKVEKLGDSNPVQEFEAMMSRRDGPNWVSKAFQSMKDKIFNLLENS
IGGDTYQKSLECLVALRKGCILEQEPKQFNDFLRHLIKFCQELHLDSFCDILASNNVMLI
SKSEAPESSDIPETETPVFPPKKEPKADDH
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaataaggaaggtctggtgctggtgattgaagttggtccgtcgatgcatggc
gtgctgccggaagttgaaaaagtttgttgtctgcttgcgcagaagaagctgatttatggc
aagtatgatgaagtgggggttgtggcatttggcactacaggtactaaaaatgacttgaca
gtggaagtgggcgggtacgagaatgtgaccgttttgagggatattaaggttgttgatgga
gatcttgtggatgttctacatcaacttcctcgaggaggtgcacctggagattttcttgat
gctgttgttgttgggatggatatgatgataaagaagtataaggaaactaacaagggaaag
aagcgtttatgtctcataacgaatgcagttactccaaccagaaacccatacgagggaacc
aaggaggatcaagtaaaaacagttgcagcacagatgatgacacatggcatgaagatggat
tgtgttgttgttagagcccaaaaggattgggatgtggacaagaagattgtggaagagaat
gatttccttttaggtctgctttccaacaaatcttcttcaaaggtgtatgtcgggaatgca
acttccttgttaggtgcactaagaactcgtaatatatcgccagtgactacatacaggggt
gattttgagctgagctctataatgaagatcaaggtatgggtctacaagaaaacatgtgaa
gagaagtttcccactttgaaaaagtattctgataaagcgcctccaacagataaatttgcc
tcacatgaaattaaggttgattacgaataccgaagtattgaagatcctaagagagttgtt
ccaccagaacaaaggatcaaaggttacagctacggtcctcaagtagtacctatatcatct
gctgagtgggatgctgtgaagttcaaaccagagaagggtgtgagacttttaggctttacg
gatgcttcaaatatcatgagacattattatatgaaagacgtaaacctcctcattgctgaa
cctggaaatatgaaggccgttcttgcaatttcagcattagcaagagcaatgaaagaaatg
aacaaagtagctatagtccgctgtgtgtggagacaggggcagacgaatgttgttataggg
gttctaactcctaatgtatcagagaaagataatgtcccagattcattttacttcaacgta
cttccttttgcggaggatgtgagagagttccagtttccatcgtttagcaatctcccatca
tcaatgcagccaaataaacagcagcaagaggctacagataagttggtacaaatgctcgat
cttgctccagctggcaaagaggaaattttgccacccaatctcacacctaatcctgttctt
gagcgcttttaccgctctcttgagttgaaatctaaggacccaagtgctaatgtccctccg
attgatgagaccctcagaaggataacggagcctgatcccgaacttcttcatcaaaacaca
gccgtgattgaggaattccgcaggtcctttgaactcaaagaaaacccaaagctgaaaaaa
tcatcccgaagaataagagaaaaaccaactggatcgagtgaagaaggagaaggaattgct
gctgctggccaagcaatggatgctactgagcacatgtctacagtcaaagtcgagaaacta
ggagattcaaatcctgttcaagaatttgaagccatgatgtctcgtagagatggtccaaac
tgggttagtaaagctttccagagtatgaaggataagatatttaatctattagagaactcc
attggaggagacacgtatcagaaaagtctcgagtgcttagttgctctccgcaaaggttgc
attctcgagcaggaaccaaaacagttcaatgattttttgcgccatctcatcaaattctgc
caggagttacacctagacagcttttgtgatattttagcatcaaacaatgtgatgctaata
agcaagagtgaagcacctgagagcagcgacattccagaaactgaaacgccggtctttcca
ccaaagaaggagccaaaagctgatgatcattga
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