Salvia miltiorrhiza (redroot sage): 131022075
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Entry
131022075 CDS
T09291
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131022075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smil02000
]
131022075
Transporters [BR:
smil02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131022075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_18
AAA_22
AAA
AAA_23
RsgA_GTPase
AAA_29
AAA_30
AAA_33
AAA_16
Rad17
AAA_28
MMR_HSR1
ABC2_membrane_3
RNA_helicase
AAA_14
NACHT
PduV-EutP
FeoB_N
AAA_17
RuvB_N
ORC-CDC6-like
cobW
AAA_5
NTPase_1
AAA_19
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
131022075
NCBI-ProteinID:
XP_057807440
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All DBs
Position
4:complement(1260934..1271355)
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AA seq
1243 aa
AA seq
DB search
MTLLLGPPGCGKTTLLKALTGNLDKSLKVSGDISYNGYKLDEFVPQKTSAYISQDDLHIP
EMTVRETLDFSAQCQGISNRAEIMAEVSRKEKEANIVPDPEVDTYMKAISVEGQRTSLQT
DYILKILGLDVCADTLFGDAMRRGVSGGQKKRLTTGEMIVGPTKALFMDEISNGLDSSTT
YQIVCCLQQLAHISDATILVSLLQPAPETFDLFDEVILMGEGKIVYHGPRGDVLEFFRSC
GFGSPERKGVADFLQEVISKKDQEQYWLETQQPYSYVSVDMFASKFRESVHGKKLTKELS
VPFDKSNSHKTAISFSVYSLPKWTLFRACMSREFLLMKRNSFVYVFKSAQLVFIAAVTMT
VFLRTQMHVDLVHATDYLGALFYTLIILLIDGMPELSMTIARLPVFYKQRDLNFYPAWAY
VIPATILKIPMSLLEALVWTCLTYYVIGFTPEAGRFFRQLILVFAVHLTSSSMFRFLASV
FRTVVASTTAGSLAILFVMLFSGFIIPRASMQVWLKWAFWVSPLSYGEIGLSSNEFLAPR
WQKELTGNTTIGDQTLANRGLNFGKDLFWVSLGALIGLTLLFNLGFALALSYLKPAGSRA
IISSDQLSKLKGNAEEHSKVSPRRTSESSQADRMALPFQPLSMVFQDVQYYVETPMAMKE
HGYTQNRLQILCDITGAFRPGVLTALMGVSGAGKTTLLDVLSGRKTSGTIEGEIKIGGYP
KVQSTFSRISGYCEQTDIHSPQITVQESVIFSAWLRLDPKIEAKTKYEFVKEVLETIELD
SIKDSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVRNV
ANTGRTIVCTIHQPSIDIFEAFDELLLLKAGGRMIYCGPLGHQSCEVIEYFEAIPGVEKI
RDNYNPAAWMLEATSTSSEAELGVDFAEIYKNSSLNEKNKELAAKLSMPHAGLKDLHFST
RYPQNGWEQFKACLWKQHWSYWRSPKYNVMRWIHMIFAAFLFGLVFWGQGNKVHNQQSLF
TLLGSMYASTLFCGINNSSSVLPYVSTERTVLYREKFAGMYASWAYSAAQVIIEIPYLFS
QSVAFTVITYPMIGYHWTAYKVFFYFYTMFCTLLYFTYLGMVLIAITPSFPVAAISQSAF
YTMFNLFAGFLVPHPQIPRWWIWFYYVIPTSWSLNGMLNSQFGDIEEKIMVFGETKTVAA
FVKDYFGYQHHLLPLVAVMLLFYPILFASLFGICISKLNFQRR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgactctattacttggtcctccaggatgcggaaagactacccttttgaaagctttaaca
ggaaatttagacaaatcgcttaaggtttctggagatatctcgtacaatggatataaactt
gatgagtttgtacctcagaaaacgtcagcttatataagccaagatgatttgcatatccct
gaaatgactgtaagggaaacacttgatttttcagctcagtgtcagggtattagtaacaga
gcagagattatggctgaggtcagcagaaaggagaaagaagccaacattgttcctgatcca
gaagtagatacttacatgaaggcaatttctgtggaaggacaaaggacttctcttcagacc
gactacattttgaaaattcttggtcttgatgtctgtgccgatacgctgtttggagatgcc
atgagaagaggtgtatctggtggccagaagaagagacttactacaggtgagatgatagtt
ggaccaacaaaagccttatttatggatgaaatctcgaatggtctagacagctcaaccaca
tatcagatagtttgttgtcttcaacaacttgcacacatctcagatgctacaatacttgtt
tcacttctccagcccgcaccagaaacatttgatctctttgatgaggtgattttgatgggt
gagggaaagattgtctatcatggacctcgaggtgatgtcttagagttctttagaagttgc
ggatttgggagccctgaaaggaaaggagtggctgattttctccaggaggttatttctaag
aaagatcaagaacaatactggctggaaacacaacaaccttacagttacgtgtcagttgat
atgttcgcaagcaaatttagggaatctgtgcatgggaagaagcttactaaggaactttct
gtaccatttgataagtcgaatagccacaagactgctatcagttttagtgtttattctctt
cccaaatggactcttttcagagcttgtatgtcgagagaatttcttctcatgaaacgaaat
tcttttgtgtatgttttcaaatcagcccagcttgtcttcattgctgctgtaacaatgact
gtattcctgaggacgcaaatgcacgtggatcttgtccatgcaactgattacttgggagct
ctattttatactcttattattcttcttattgatggaatgccagagctctctatgactata
gcaaggcttccagttttctacaaacagagggacttgaacttttaccctgcatgggcatac
gttattccagcaaccatcctgaaaattcctatgtcattgttggaagctctggtgtggacg
tgtcttacttattacgttattggttttacccctgaggctgggaggttttttcgccagctg
attttagtttttgctgtgcacttgacatcatcatctatgtttcgattcctggcatctgtc
ttccggactgtagttgcatccacaacagctggaagtttggccatattgtttgtgatgtta
ttcagtggttttataatcccacgggcatccatgcaagtctggttgaagtgggcattttgg
gtttctcctctgtcgtatggggagataggcctttcgtccaatgagtttcttgctccgaga
tggcaaaaggagctgactggaaatacaacaataggagatcaaacacttgcaaaccgtggg
ttaaactttggtaaagatctgttttgggtatcactaggcgcccttatcgggttaacactg
ctcttcaaccttggctttgcactggcgttgagttacttaaaacctgctggttctcgtgct
attatttcaagcgaccaactttcaaagctaaaaggtaatgccgaagagcattccaaagtt
tctcctcgtagaaccagtgaaagttctcaagcagacagaatggctttaccctttcaaccc
ctaagtatggtattccaagatgtgcagtactatgtggaaacccccatggcaatgaaggag
catggttacactcaaaataggcttcagattctttgtgatatcaccggtgcattcaggcct
ggtgttctcacagcactcatgggtgtcagtggggctgggaaaacgacgcttcttgacgtg
ctttctggcaggaaaactagtggcaccatcgaaggagaaataaaaatcggagggtatcct
aaagtccagagtacattttctcggatttcaggttactgcgaacaaactgacatacattct
ccacaaattactgtgcaagaatcagttatattttcagcttggctacgtcttgatccaaaa
attgaggcaaagacaaaatacgaatttgtcaaagaagtccttgaaaccattgagcttgac
agcatcaaagattcattagtgggcttgccgggtgttgatggtctgtcaactgagcaaagg
aagcggctaaccatagctgtggagctagttgctaatccctccatcatctttatggatgaa
cctacgactgggctggatgcccgagcagcagcaatcgttatgcgggcagtgaggaacgtg
gcaaatactggaagaaccattgtgtgcaccattcaccaaccgagcattgatatttttgaa
gcatttgatgagttattactattgaaagctggaggtcgcatgatctattgtgggccgtta
ggtcatcagtcttgtgaagtgattgaatattttgaggccattcctggtgtggaaaaaatc
agagataactataatccagctgcatggatgttggaggccacttccacttcctcagaagct
gaacttggcgtagactttgctgagatttataagaattccagtttaaacgagaaaaacaaa
gagcttgcggcgaaacttagcatgccacatgctggattaaaagatctgcatttctcaacc
cgctatccacaaaatggttgggagcaattcaaagcttgcctctggaagcagcactggtct
tactggaggagtcctaagtacaacgtgatgcgctggattcacatgatttttgcagctttc
ctttttggcttggtgttctggggtcaaggaaacaaagtacataatcagcagagtctattc
actctgctgggctcaatgtacgcctccacactattctgtggtataaacaactcctcttca
gttctgccgtatgttagcacagagcgaaccgttctctacagagagaagttcgctggaatg
tatgcttcgtgggcttactcagccgcgcaggtcattatcgagattccatatctcttttca
caatcagttgcattcacggtcatcacatatccgatgatcggataccactggaccgcgtac
aaggtttttttctacttctacacgatgttctgcacgctgctgtacttcacttacctcgga
atggtgctgattgccataacaccaagctttcccgtggctgccatttcgcagtcggccttc
tacaccatgttcaatctgtttgctgggttcttggtccctcacccgcaaattccgaggtgg
tggatctggttttattatgttattccgacttcgtggtcgttgaatggcatgcttaattca
caatttggtgacatagaagagaagattatggtgtttggagagaccaaaacggtagcagcc
tttgtgaaagattattttggatatcaacaccatcttctacctcttgttgctgtgatgttg
ttgttttaccctattctttttgcttccctttttggaatttgtatttccaagttgaacttt
caaaggaggtaa
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