Salvia miltiorrhiza (redroot sage): 131022127
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Entry
131022127 CDS
T09291
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131022127
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131022127
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
131022127
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
Prok-RING_1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131022127
NCBI-ProteinID:
XP_057807521
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All DBs
Position
4:1783883..1785322
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AA seq
358 aa
AA seq
DB search
MSAQPPPTTIFDGGSSSVITQMPQLPPPYTDRPSPSSRSSSSSDDVSSSSIVIVIIIIAS
AVIISASIYLLLRLLSKRIHRSFSAADDVVLRRDSSSQNPSQPQCHAAPPDALLDSLPVF
TFRSVTGNLTGGDCAVCLSKFEPHDQLRLLPICCHAFHATCIDAWIVSNQTCPLCRSPVI
VSDSEVFDKILPNPNRGAGAGGFRDGNGNSGSFRIEIGSISRRRGGGAPELAEGERRSYS
IGSFEYIVDDSGYEVAAGSVTHRRGASDCTSADKESSVGIPIPEAPGEALAADVSSGRNW
LRDYVDRLASVSFRSSGRFFSGSSRRSDPVAAAAAVDDLEANRVGEEISELFRWLSGI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccagccgccgcccacgaccatcttcgacggcggctcctcctccgtcatcacg
caaatgccacagctgccgccgccctacacggacaggccatcgccttcttcccgatcctcc
tcctcgtccgacgacgtctcgtcgtcttcgatagtcatagtcattatcatcatcgcctcc
gccgtcatcatctccgcctccatctacctcctcctccggctcctctccaagcgcatccat
cgcagcttctccgccgccgacgacgtcgtgctgcggcgcgactcctccagccagaaccct
agccagccgcaatgccacgcggcgccgcccgacgccttgctggattccctcccggtcttc
acgttccgctcggtcaccgggaacctcaccggcggcgactgcgccgtgtgcctgtcgaag
ttcgagccgcacgatcagctccgcctgctgcctatctgctgccacgcgttccacgctacc
tgcatcgacgcgtggatcgtctccaatcagacgtgcccgctctgccgctccccggtgatc
gtctccgattccgaggtgttcgataaaatactccccaatccgaaccgcggcgccggcgcc
ggcggttttcgcgacggaaacggcaacagcggcagtttccggattgagatcggaagcatc
agccgccgccgcggcggaggcgctccggagctggcggaaggagagcggcggtcgtattcc
ataggctccttcgagtacatcgtggacgatagcggctacgaggtcgcggcggggtcagtc
actcaccgcagaggagcttccgactgcacctccgcggacaaggaatcgtcggtcgggatt
ccgataccggaggcgccgggggaggcgctcgcggcggatgtttccagcggcaggaactgg
ctgcgagattacgtagacagattggcatcagtgtcgtttagaagctcgggaagattcttc
tccggcagcagccggcggagcgaccctgtcgccgccgccgccgccgtggacgatctggag
gcgaaccgcgtcggagaggagatcagcgagctgttccggtggctttctgggatatga
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