Salvia miltiorrhiza (redroot sage): 131022152
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Entry
131022152 CDS
T09291
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131022152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131022152
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131022152
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
131022152
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
131022152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
Viral_helicase1
UvrD-helicase
Cas_Cas4
nSTAND3
DEAD
ResIII
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
131022152
NCBI-ProteinID:
XP_057807551
LinkDB
All DBs
Position
4:2002634..2014761
Genome browser
AA seq
1443 aa
AA seq
DB search
MAPRKRTSSGGKKSSNPNREPQQSEPSKFGIQHFFERHSQTQSQKTLSQNRDDDPTGGSA
ANRNSRIVNRAEVGPGNPGGAASLGKIESRTECVRGVNPGSNLVNASDFVSRNDKSGSDV
PVDDHIGLCRESSTKSCDDGVVDVNKVEKTENLLKAEVSTRSPDTLRDNLLPVVFDDEEN
QLEVTPETSKSVSVKRFKFSPGMLIKQSQDDMVDEVTWKISPVNERLHAMSKNLPGRIRV
LADSTRFNSMNFQECSQEKVKISPNMSGKLEKWLSSPPLKAHKKPLICSDGLASRKLNQG
HDLSCHGHQRISNSTDKSELRDSQSPFTTPPSLSCCPDKAVEEVDLKGVSNQLGSRQHKK
ALIELLDQVEDVISVESLSSKDRRSIAESSSSKDGRSHLDVEGCPRADLVVHYSTTNSEE
NRSTTDSNFNFLVLEVSEKHGPSGSSGPPSRFKVLRLLNEQNGAERVLQLWDDWYFSVVA
PGDTVNVIGEFDSKGKCDVNREKNFFIVHPDILVSGTRVSASFSCPRRTILDERIKSTEN
STAALMGTLLHQLFQAGLISETPSKEFLEEYARTVLQKSLESLYACGVNENDIFRTMIEA
IPKLLNWISSFRDSQDSKSPTVDFKCDEGLKKVKICEVIDIEEMAWGQRYGLKGMIDASV
RVRTNTNSAEANEVIMPLEFKTGKATTGQAAMEHSAQVMLYTLLMSERYMMNIEYGLLYY
LHTDQTQGISIRRSDLIGLIMQRNALANDLLKASTTQQLPPMLQSPNVCRSCRHLNVCSV
YHKANGGTAEGSGLGDMYDSLVSHLTQTHAIFLQKWERLIDLEAKHVEIAKKESWLSNSS
RNNHHPISLSSLVLDNSDKSSERKLFRGNRFVYRFVSHEYPLLDAEQPNRDTLCASSLLE
HTFRNGDYVILSTEPDHLRVANGIIVDIGNFHVSVSLGKRLRLPGHSPRSMTEDLRQQSW
RIDKDESLTSFAIMRFNLIQLFLQNESSSCLRKKVVELEMPRFDSGCIFSQDPAISYVWS
EKSLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLLRGASILLTSYTNSAV
DNLLIKLKAQGVDFIRIGRYEAVHEEVQENCLSVVNMDSTQEIKERLEKVKVVAVTCLGI
TSPLLTNKRFDICIMDEAGQITLPVSLGPLAFASRFVLVGDHYQLPPLVQSPEAKENGMS
VSLFCRLSEAHPHAIAALHFQYRMCAAIMELSNALIYGNRLRCGSTEIENAKLKYRTSAS
SPAWLMKQVLDPNQPVIFINTDLLPAYESNDRKALNNPIEAHIIAEAVKTLVLRGIEGQA
IGIITPYNSQANLIRGAVTEHVEIHTIDKYQGRDKDCILVSFVRSSETPRNSTSSLLGDW
HRINVALTRAKKKLIMVGSCRTLSKVPLLKLMIEKVEELCGMVVVSKKEIKYQLELKRCS
QLS
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcggaagaggacgagctcgggaggcaagaagtcgagcaatccgaatcgcgag
ccgcagcaatctgagccctccaaattcggtatacagcacttctttgagcgccactcccag
acccagagccagaaaaccctctcccagaatagagatgacgaccccacaggtggttctgcc
gccaatcgaaactcccggattgtgaatcgtgctgaagtggggccggggaatcctggcggt
gcggctagcttagggaagattgagtcacgaactgaatgtgtgaggggtgtaaaccctgga
agtaatttggttaatgcgagtgactttgtttctcgaaatgataaaagcggaagcgatgtg
cctgtggatgatcatattggtttatgccgtgagagttctaccaaaagttgtgatgatgga
gttgtagatgtaaataaagtggaaaagacagaaaatttgttgaaagctgaggtctctact
cgatctccggatacactgcgagataatttattgccggtggtgtttgatgatgaggagaat
caactggaggtgacaccagagacttccaagtctgtctccgttaagcgtttcaagttttca
cctggaatgctaatcaagcagagccaggatgacatggttgatgaggtgacatggaaaatt
tctccagtaaatgagaggctgcatgctatgtctaaaaatttacctgggaggataagggtg
ttggcagattctacaaggtttaattcaatgaattttcaagaatgctcacaggaaaaggtg
aaaatctctcctaacatgtcaggaaagcttgaaaagtggctttcgtcacctccactaaag
gcgcataagaaacctttgatatgctctgatgggcttgcgtcaagaaagctcaaccaaggt
catgatttaagttgtcatggacatcaaagaatttcgaatagcactgataaatctgagtta
cgtgattctcagagcccgttcactaccccaccctcactatcttgttgtcctgataaggct
gttgaagaagtggatctcaaaggggtatccaaccagctgggttcaaggcagcacaaaaag
gctttaattgaactcctagatcaagtagaggatgtaatttccgttgaaagtttatcaagt
aaagaccgtagatcaattgctgaaagttcatcaagtaaagatggtagatcacacttagat
gttgaaggatgccccagagctgatcttgttgtacactactcgacaacaaattcagaagaa
aatagatccactacagactctaatttcaattttcttgtattggaggtttcagaaaagcat
ggaccttctgggtcatctggtcctccatcccgtttcaaggtgctacgcttattgaatgag
caaaatggagctgaacgggtcttgcaattgtgggatgactggtacttcagtgtcgttgct
cctggagacactgttaatgtcattggtgaatttgattccaaggggaagtgtgatgtcaac
cgtgagaagaactttttcatcgtccacccagatatcttggtatctggaactcgggtttct
gctagtttcagctgcccaaggcgcactatcctggatgagaggataaaaagcaccgagaat
tcaacagcagcattgatgggtactttattgcatcagctttttcaggctggcctcatcagt
gaaaccccctcgaaagaatttttagaagaatatgccagaacggtgcttcagaaaagtctt
gagagtctttatgcatgtggagtgaatgaaaatgatattttcagaactatgattgaggca
atcccaaaattattgaattggatatcttcctttcgagattcacaggattcgaaaagccca
accgtcgactttaaatgtgatgaaggacttaagaaggtcaaaatatgtgaggtaatcgac
attgaagaaatggcctggggccaaaggtatggattgaaaggaatgattgatgcttctgtc
cgagttagaacaaacacaaattctgcagaagctaatgaagtaattatgcctctggagttc
aaaactggaaaggcgacaactggacaggcagctatggagcacagtgcacaagttatgcta
tatactctcctgatgtcagagcgatacatgatgaacattgaatatggtcttctttattat
cttcacacagatcaaacacagggaatctctattagaagatctgacttaatagggcttatt
atgcaacgcaatgcactggcaaatgatctgcttaaggcatcaacaactcagcaattgcca
ccaatgctacaaagtccaaatgtttgcagaagttgccggcacctgaatgtctgcagtgtt
tatcacaaggcaaatggtggtactgccgaaggaagtggactgggtgacatgtatgattca
cttgtctcccatttaacccaaacacatgcaatttttctccagaaatgggagagactaatt
gatctggaggctaaacatgtggagattgcaaagaaggagagctggctctctaacagttcc
aggaataaccaccatcccatttctctatcatccctggttcttgataattcagataaatca
tcagagagaaaacttttcagaggaaaccgatttgtttaccgctttgtgtctcatgaatac
cctttgcttgatgctgaacaaccaaatcgcgatacattatgtgcttcctctctgttagaa
catacgttccggaatggggattatgtgatattaagcactgaaccagatcatctacgagtt
gctaatgggatcattgtggacatcggtaacttccatgtctctgtatctttgggtaagcga
ttaaggcttccaggccatagtcctaggtcaatgacagaagatctccgtcagcaatcctgg
cgaattgacaaagatgaaagtttgacatcatttgcaatcatgaggttcaatcttattcaa
ctctttttgcaaaatgaaagtagttcttgtctgaggaagaaggttgtggaacttgagatg
cctagatttgatagtggctgcatatttagtcaagatcctgctatctcatatgtctggtcg
gagaaaagtttaaatgatgatcaaagaagagctatactcaagatactcacagctaaggat
tatgctcttattcttggaatgcctgggacaggcaaaacatccaccatggtacatgctgtg
aaggctttgctgctaagaggtgcatccattttgctcacatcctacacaaactcggccgtt
gacaatttactaatcaaattgaaagctcagggcgtagattttataagaattggaaggtac
gaggcggtgcatgaggaagttcaagagaattgcttatcagttgtgaatatggatagcacc
caggagattaaggaaaggctggaaaaagttaaagttgttgctgttacttgcttgggaata
actagccctttgctaactaacaagagatttgacatatgcatcatggatgaagcaggacag
ataacactaccggtatccttgggcccactagcatttgcgtcaagatttgttcttgttggg
gatcattatcaattacctccacttgtccagagtccagaggctaaggagaacggaatgagt
gtgagcctcttttgcaggctctctgaagcacatccacatgcgattgcagctttgcatttc
cagtaccggatgtgtgcagccataatggaactctcaaatgccttgatatatggaaatcga
ttgcgttgtggttctacggaaatagagaatgcaaagctcaagtacaggacttcagcttct
tcacctgcatggctgatgaagcaggttttggatccaaaccaacctgtgatatttatcaac
acagatttgttgcctgcatatgagagtaatgaccgcaaagctctaaacaacccaattgag
gcacatattattgcagaggccgttaaaactctagtacttagaggcattgaagggcaggct
attggcattattactccttataactctcaggctaatctcattcgaggagctgttactgaa
catgtggagatccataccatagacaaatatcagggcagagataaggactgcatattggtg
tccttcgtgaggtcctccgaaacccctaggaacagcacatcttcacttctcggagactgg
cacagaataaacgtagcccttacacgagccaagaagaagttgatcatggtggggtcatgc
agaactctgtcgaaagtgccattgctaaaactcatgattgagaaggtggaagagctttgt
ggtatggtggtggtttcaaagaaggaaatcaaataccaacttgagctaaagagatgctct
cagctcagctga
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