Salvia miltiorrhiza (redroot sage): 131022169
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Entry
131022169 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131022169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smil04040
]
131022169
Ion channels [BR:
smil04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131022169
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
PBP1_TM
IQ
Motif
Other DBs
NCBI-GeneID:
131022169
NCBI-ProteinID:
XP_057807580
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Position
4:2224786..2231203
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AA seq
748 aa
AA seq
DB search
MFDPNYKTXYIGGQKEKFVRLEGPDSFRSEMAQKNRCGFSLEGFVNSRAYDYKYIKVIKM
VQRGSEGLLTFGRSLKSGVTKAVFPEDLKVSERRIFDPQDKSLLFWNKLLVISCIFAVSV
DPLFLYLPVFQPDKMCLHIHDSLAYTTTTLRTVIDVFYFARILLQFRTAYIAPSSRVFGR
GELVIDPKEIATRNIHRYFFVDLFSVLPLPQVVVWRFLHGAEDYDVLGTKQALVIIVFVQ
YIPRFLRFVPLTSELKKSQGVFAETAWAGAAYYLLWFLLASHIVGALWYLFAIERRDTCW
YRACYQNRPNCDTQNLYCAHEVTNLEAWKNISATYITPRCAITDEEKSPFKYGIYAQALS
SGVLDSEKFISKYFYCLWWGLQNLSTLGQGLTTSTYPGEVLFSIAVAILGLLLFALLIGN
MQTYLQSLTVRLEEMRVKKRDSEQWMHHRVLPTELRERVRRYDQYKWMETRGVDEESLVQ
NLPKDLRRDIKRHLCLNLVRRVPLFANMDDRLLDAICERLKPSLYTDNTFVLREGDPVDE
MLFIIRGRLDSVTTDGGRSGFFNRGTLKEGDFCGEELLTWALDPKAASNFPPSTRTVKAL
TEVEAFALTADELKFITSQFRRLHSRQVQQTFRYYSQQWRTWAATFIQAAWRRHARRKLA
ELNQSDYDNSGSDYSSEDDDYDDDVQARLLSGSSSSRTDAGTSSRFKATLFASRFASNAM
RGVSRIRGKSGVGKIKLAKPPEPDFSAN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccccaattacaagacancatatattggtggccaaaaggagaaatttgtaaga
ttggaaggcccggactcttttagatcagaaatggctcaaaagaatagatgtggatttagc
ttagagggttttgtcaactcaagggcctacgactacaaatacatcaaagtcattaaaatg
gttcaacggggatctgaaggacttcttacatttggtcggtcactaaaatccggagtcaca
aaagcagtattcccagaggatctcaaagtttctgaaagaaggatatttgaccctcaagac
aagagtcttctgttttggaataagcttttagttatctcctgcatttttgcagtatcagtg
gatcctttatttttgtatcttccagttttccagcctgataaaatgtgcctacatatacat
gacagtttggcatacacaactacaactctgaggactgtaattgatgtattttactttgca
cgcattcttctccaattccgcacagcttatatcgcaccttcatctcgggtttttggacga
ggtgaacttgtgattgatcccaaagaaatagcaactcggaatatacatcgttatttcttt
gtggatctcttttccgtgctacctctaccacaggttgtagtgtggaggtttttgcacggg
gcagaagattatgatgtattgggtacaaaacaggctctggtgataatagtttttgttcaa
tacattcctaggtttctgaggtttgttcctcttacttcggagttgaagaagagtcagggc
gtatttgcagaaacggcatgggctggtgcagcttattacttgttatggttcctgcttgct
agtcatattgttggggccttgtggtatctatttgccattgaacgcagagatacgtgctgg
tatcgagcatgctatcagaatcgtcctaattgtgatacacaaaatctatattgtgcccat
gaggtcacaaaccttgaagcatggaaaaatatcagcgcgacatatattacaccaagatgt
gcaataactgatgaggaaaaatccccatttaagtatgggatatatgcccaagctttgtca
tctggtgttcttgattctgaaaaatttatctcaaagtacttctattgtttgtggtggggc
ctgcagaatttgagcacactcggtcaggggcttacaaccagcacgtaccccggggaagtc
ctgttttctatagcagtagccattttgggactcctcttatttgctctgctcattggtaat
atgcagacttatcttcaatctctgacagttcggctggaagagatgagggtcaagaaacgc
gactctgaacagtggatgcatcaccgagtgctaccgacagagttgagggaaagagtgcga
cgctatgatcaatacaaatggatggaaactagaggagtcgacgaggagagcttggtccaa
aacttaccaaaagaccttagaagagacatcaaaaggcacctgtgtttgaatttagttaga
cgagtccctctttttgcaaacatggatgatcgattgctcgatgccatctgtgaaaggctc
aaacccagtctatacacagacaacacgttcgtgcttcgtgaaggagacccagtggatgaa
atgctcttcatcatccgcggccgcctagacagcgtgacaacagatggtgggagatccggt
ttcttcaatcgaggcaccctgaaagaaggcgatttctgtggagaggagctcctcacatgg
gctctggatcctaaggctgcttcgaacttcccgccatccacgcgtactgtcaaagctttg
acggaggtggaggctttcgctctaacagcagacgaactgaagttcatcaccagccagttt
aggcgtctccatagccgacaggtgcagcagaccttccgctactactcgcagcagtggagg
acttgggcagccacttttattcaagcagcatggcgtcggcatgccagaaggaagcttgct
gagctcaaccagagtgactatgacaacagtggatcagattacagcagcgaagatgatgac
tatgatgatgatgtgcaagctcgattgctcagtggaagctcctcgtccaggacagatgca
ggcacttcttccaggtttaaggctaccttgttcgcgtctagattcgccagcaacgctatg
cgtggagtgagcagaattcgaggcaaatcaggtgttgggaagatcaaattggccaaacca
cctgaacctgacttctctgccaactag
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