Salvia miltiorrhiza (redroot sage): 131022237
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Entry
131022237 CDS
T09291
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131022237
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131022237
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131022237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_UBOX
zf-rbx1
IBR_1
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
131022237
NCBI-ProteinID:
XP_057807687
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All DBs
Position
4:complement(3106857..3111187)
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AA seq
340 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGEHCEFAHDWKAPSNNICTFYQKGICTYGSRCRYEHVKVSHSP
STVLSSSEGPLPIERPVSTADVTAEHSASAGPPAWVGGSGHRDMLNDDYHIGHSNHVGTS
DRGICSFAAVGECPRGEDCPHIHGDLCPICEKQCLHPFRPQEREEHLKSCEKRRKHLEAL
RGSQEIECSVCLEAVLSKPTSAERKFGILSECDHSFCISCIRNWRSSSPTSGINVNSAVR
TCPICRRLSYFVIPSVVWYSSSEEKQDIVQSYKTRLRSIDCKHFDFGTGTCPFGTSCFYR
HAFNDGRLEEVVVRHVGADDGDTVIPKDIRISDFLNLQIR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgggttctgtgtaaattctttgctcatggcgcatgcttgaaaggggagcac
tgtgaatttgcgcatgattggaaggccccatcaaacaatatatgtaccttctatcaaaag
gggatttgcacatatggtagtcgatgcagatatgaacatgtcaaagtttctcattcccca
tctacagttctttcttcatcagaaggtcctctccccattgagcgcccagtgtcgaccgca
gatgttactgctgaacattcagcttccgctggaccgcctgcatgggttgggggatcaggg
catcgtgatatgctaaatgatgattatcatatcggccattctaaccacgttggtacatcc
gatcgtggtatatgttcttttgctgctgttggtgaatgcccacgaggagaagactgccct
cacattcatggggacctgtgtccaatctgtgagaaacaatgcttgcatccctttaggcct
caagaaagagaagagcacttgaagtcttgtgagaaaaggcggaaacatttagaagcgcta
agaggtagtcaagaaatagagtgtagtgtgtgtctggaggctgtcctctcaaagcctaca
tcagcggaaaggaaattcggaattctatcagagtgcgaccattcgttttgcatatcatgt
atcagaaattggcgcagtagttctccaacttctgggattaatgttaattctgctgtaaga
acttgccctatatgtcgaagactttcatacttcgtcattcctagtgtcgtttggtattcc
tcgagtgaggaaaaacaagatattgttcagagctataagacaagactgaggtctattgac
tgcaagcactttgactttggaactggaacttgtccatttgggacaagttgcttctacagg
catgcatttaacgatggtcgtcttgaggaagttgttgtacgccatgttggggctgatgat
ggagatacagtgatccccaaagatataaggatctccgactttcttaacttgcagataaga
tga
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