Salvia miltiorrhiza (redroot sage): 131022308
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Entry
131022308 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131022308
03036 Chromosome and associated proteins [BR:
smil03036
]
131022308
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
131022308
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Topoisomerases
131022308
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
131022308
Centrosome formation proteins
Centriole proteins
131022308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
131022308
NCBI-ProteinID:
XP_057807739
LinkDB
All DBs
Position
4:complement(4481287..4487990)
Genome browser
AA seq
1488 aa
AA seq
DB search
MAGAKKAPLTSSNNANIPPPEATTSAAGSKKTIEQMYQKKSQLEHILLRPDTYIGSVEKH
TQTLWVYDNDHMVQRSVSYVPGLYKIFDEILVNAADNKQRDPKMDSVKVTIDVASNSISV
YNTGDGIPVEIHQEEGVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFV
VETADGKRQKKYKQVFSNNMGAKSEPSVSKCRATENWTKITFKPDLAKFSMTCLEDDVVA
LMKKRVIDIAGCLGKTVKVELNGQVFQFKSFSNYCELYLNSVAGSGSDPLPRFEEYVHDR
WQICISRSDGQFQQVSFVNSIATIKGGTHVDYVTNKIASHLVTVINNKNKKNKGFDVKPH
NVKNHLWVFVNALIDNPAFDSQTKETLTLRAGSFGSSWDFTSKFLDKVAKSDIMKNIEEW
AEFKQQKDLKKTDGSKNKRVFVEKHEEAHEWGKKEADQCTLILTEGDSAKALAIAGLTIV
GKRHYGVFPLRGKLLNVREASHNQIMQNAELTKIKQILGLQHGLKYDDAKSLKSLKYGHV
MIMTDQDHDGSHIKGLLINLFHSFWPSLLKVPSFLLEFITPIVKAKHKDGRRTEAFYTMP
QYEAWKERLGTDAKNWTIKYYKGLGTSTGEEAKEYFRDIDKHKKDFVWENDEDGEAIELA
FSKKKIEARKNWLRQFEPGTFLDDADKHIKYRDFVHKELILFSIADVQRSIPSMVDGLKP
GQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDYVGSNNINLL
LPNGQFGTRGQGGKDHASPRYLYTQLAPVTRFLFPKADDILLNYLNEDGQSIEPSWYMPI
IPMVLVNGSEGIGTGWSSYVPNYNPFDIIRNIRHLLNDEPLEVMHPWYKGFIGSIEKNVM
KDTGSYTISGNVEEVDENTLRITELPIRRWTQDYKEFLESVSFDNDKSIDPFIKEFCDNS
GGEIVHFSLCMSEERLPAVKQEGLLKKLKLSTSISTNNMHLFDSRGVIKKYDTPEQILEE
FFYLRLEFYDKRKKAVLAILEKEMLKCDNKCRFIQCVVEGSIIVSNRKRADLFLELKEKG
FTPFPKKEIASEVSVAGAANDAEEPESEVPIAQGASSGDYDYLLSLAIGTLTREKMQQLL
AEMEKRVAEVEDLKSTSVKSLWMRDIDALEAKLLEELNKYEKKWEADRKRLHEGAYLKKG
AQKNPRKKNQKTTTKKESAEDPMEISENTMPETDKVAEVKKPRAKAPAKKKAPAAKTTAT
ADEDDDDIADLRQRMAAYNFDSSPDRSEDLESEVSQMPTKKQPAKRGAAKKKPSSSISEF
DDNGDDDDXFEQEEKKKKGGRKPANGKAAAKPPVAATKKRAPAGKQLVGQKLITQVLKPA
EVSPDKKVRKMRASPFNKKSGSVLGRTINVDDEEDETSEASASTLGSASDAAGAGAGAGA
VAPAVAARPKRANRVQMRYVISDSESDKADDTDDTAEEDDLGFSDDED
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcaaagaaggcacccctaacctccagcaacaatgccaacattccaccgcct
gaagccaccacctccgccgctggcagcaagaaaaccattgagcaaatgtaccagaagaaa
tcgcagctcgaacacatcctcctccgccccgacacctacattggatcggtggagaaacac
acccaaaccttatgggtctacgacaacgaccacatggtccagagatcagtctcctatgtt
cccggtctgtacaagatcttcgacgaaatcctcgtcaacgcagccgacaacaaacagaga
gaccccaagatggactctgtgaaggtgactattgacgtcgcgtccaactcgattagtgtg
tacaacactggggatgggatccctgttgagatccatcaggaagaaggggtttacgtgccc
gaattgatatttgggcatttgttgacgagtagcaattatgatgatactgagaagaagacg
acgggtgggaggaacgggtacggggccaagctcacaaatattttttcgactgagttcgtg
gtcgagactgcggatggcaagcggcagaaaaagtataagcaggttttctccaataacatg
ggagcaaaatccgagccatctgtttcgaaatgcagagcaaccgagaattggactaagatt
actttcaagccagatttggcgaaatttagcatgacatgcttggaggatgatgttgttgct
ctcatgaagaagcgtgtgattgacattgcgggttgccttgggaaaacagtcaaggttgag
ttgaatggacaggtgtttcagttcaagtcgttctcaaactattgcgaactttatctgaat
tctgtagctggttctggctcagatccgctcccaagatttgaagagtacgtacacgatagg
tggcagatttgtattagtcgcagtgatggacaatttcaacaggtcagctttgtgaattca
atcgcaacaatcaagggtgggactcacgtggattatgttactaataagatagcaagccat
cttgttactgttataaataacaagaacaagaagaacaaaggctttgatgtcaagcctcat
aatgtaaaaaatcatttgtgggtttttgtcaatgcactcattgacaaccctgcttttgac
tctcaaaccaaggagaccctgacacttcgtgcaggaagttttggctcatcttgggatttc
acatcaaaattcttggacaaagtggccaagtcagatatcatgaagaatattgaggaatgg
gcagagtttaaacaacagaaagatcttaagaaaacagatggatcaaaaaacaaaagggtc
ttcgtagagaagcatgaagaagctcacgagtggggtaaaaaagaggcagaccaatgtacg
ttgattttgacagaaggagattctgccaaggcgctagcaattgctggtctcacaattgtc
gggaaaagacactatggtgtgtttcctcttagaggaaagttactcaatgtgagggaagcg
agtcataatcagataatgcagaatgctgagttaactaagattaagcagattcttggtctc
cagcatggtttgaaatatgatgatgccaaatcactcaagtcactcaagtatggtcacgtg
atgattatgactgatcaggatcatgatggttcccacatcaagggattattgatcaattta
ttccattcattttggccatcattgcttaaagttccttcttttcttctggagttcataacc
cctatcgtcaaggctaaacataaggatggcagaagaacggaagcattctacacaatgcca
cagtatgaggcatggaaagaaaggctggggactgatgcgaaaaattggaccataaagtac
tacaagggtttgggaacaagtacaggcgaagaagctaaggagtactttcgagacattgac
aaacataagaaagattttgtttgggagaatgatgaagatggtgaggcaattgaacttgct
ttcagtaagaagaagatcgaagccagaaaaaattggctcagacaatttgagcctggcaca
tttcttgatgatgcagacaaacacattaagtaccgggactttgttcataaggaactgata
ttgttctcaatagcagatgttcagagatcaattccatccatggttgatggactgaaacct
ggacaaagaaagatacttttctgttctttcaagaggaactttgtcaaggaagcaaaagtg
gcacaattctctggttatgtatcagagcattcagcttatcatcatggagagcagagcctg
gctagtaccataattggtatggcccaagattacgtgggcagcaacaatataaatcttctg
ttaccaaatggtcagtttggtactcgaggccagggcggcaaggatcatgccagtcccagg
tacctttacacgcagctggctccggtaactagatttttgtttccaaaggcagatgacatt
ctcctcaactatttaaatgaagatgggcagtcaattgaaccatcatggtatatgccaatc
ataccaatggttctagtgaatggaagtgaaggaataggcactggatggagttcctatgta
cctaattacaacccttttgacattatacgaaacattaggcatttgttgaatgatgaaccg
ttggaggtaatgcacccatggtataaaggattcattggttcaattgagaaaaatgtgatg
aaggatactggaagctacactattagtggaaatgtagaggaagtggatgagaatactcta
aggataactgagcttccaattcgaaggtggacacaggattacaaggagtttttggagtct
gtttcgtttgacaatgataagagcatagatcctttcatcaaggaattctgtgacaacagt
ggtggagaaatagtacatttctctctttgtatgtcagaagagaggcttccagctgtcaag
caagagggcttgcttaagaaattaaagctatccacgtctattagcacaaataacatgcat
ctctttgactcacggggtgtaataaagaaatatgacactcctgaacagattcttgaagaa
ttcttttatctaaggctggagttctatgacaaacgaaaaaaagctgtgttagccattctt
gagaaggagatgctgaaatgtgacaacaagtgtagatttatacaatgtgttgtcgaaggt
agcatcattgtgagcaacaggaaaagggctgacttgttccttgagttgaaagaaaagggt
ttcactccatttccaaagaaggaaattgcttcagaagtttctgtggctggtgcggctaat
gatgcagaggaacctgagagtgaagtgccaatagcccaaggggcttcttctggtgattat
gactacttgctgtctttggcgattggaacgttgacacgtgaaaagatgcaacagttgctt
gctgagatggaaaagcgtgtggcagaagtggaagaccttaaatcaacatcagtgaagtcc
ttgtggatgagagatattgatgctttggaggctaaacttcttgaggaactcaataaatat
gagaaaaaatgggaagctgatagaaaaaggttacatgagggtgcgtatctgaagaaagga
gcacaaaaaaatccacgaaagaagaatcagaagacaacaaccaagaaggaatctgctgaa
gatccaatggaaatttctgagaacactatgcctgaaactgataaagttgctgaagtcaag
aaaccgagagccaaagcacctgctaagaagaaggctccagcagctaagaccactgcaact
gctgatgaagatgatgatgacatagctgatcttagacagagaatggctgcttacaatttt
gactcttctcctgatcgttcagaagatcttgagtcagaggtatcccagatgccaacgaag
aaacaaccagccaaaaggggtgctgcaaagaagaagccttcatcaagtatttcagagttt
gatgacaatggtgatgatgatgatnnttttgagcaggaagagaagaaaaagaagggcgga
aggaaaccagctaacggcaaagcagcagcaaaaccacctgttgctgcgacgaagaagaga
gcaccagctggcaaacagcttgtagggcagaagctgatcactcaggtgctgaagcctgca
gaagtttctcctgataagaaagtgaggaaaatgagggcatcgccatttaacaagaaaagc
ggttctgttcttggaaggactatcaacgttgatgacgaagaagatgaaacttcagaagcc
tctgcttctactttgggtagtgcgagtgatgctgcaggtgcaggtgcaggtgcaggtgca
gtagcacctgcggtggcagctaggccaaagagggccaaccgggtgcagatgaggtatgtt
ataagtgattctgagagtgataaggctgatgacaccgatgacactgctgaagaagacgat
ttgggcttcagtgatgatgaggattag
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integrated database retrieval system
