Salvia miltiorrhiza (redroot sage): 131022710
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Entry
131022710 CDS
T09291
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131022710
03460 Fanconi anemia pathway
131022710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131022710
03036 Chromosome and associated proteins [BR:
smil03036
]
131022710
03400 DNA repair and recombination proteins [BR:
smil03400
]
131022710
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131022710
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
131022710
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
131022710
FA (Fanconi anemia) pathway
Downstream FA components
131022710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
131022710
NCBI-ProteinID:
XP_057808208
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All DBs
Position
4:complement(11280501..11286761)
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AA seq
1124 aa
AA seq
DB search
MSTWRIFSGDRNDFRWETADQQLRIEEFSDAVAEDTRRLPSMADLLLLGSSKILENGRRD
VEEQPTFRTGLGKSVEVKQSSIARARSVLGEVDYTLTDSGHSDGREKGFATFRPISNMNS
MESAVMSTSAFHSASENVTQISNSMFQTGSGKTVNISSAGLLRAKALLGLDGTYDQEQTA
KQSISTELLASDNPSHLETRKLGNFILSSSTRVLASSKVKSIPRASESMKFPKCMNAVSE
PPQVKFQTAGGRSISVSSDALERAKSLLGNLEVDSFLNEASTADPLFSVIDGKPSRLSNQ
KGDFTTPLLHKGIENSDHPLKIFTSSPNSSSYKRNSFGKSERLEPGHNLIAQFDAEAELN
SSKRPYNGFTGDRKPPKKNSHSNTDCLEYAVLPKSDPSKSSSNKALVDISNTMNIDNKQC
FGEKRRLRGISSVSPFKKPRSSFVTPLKKTNLSDIDVLSRLAPKEIPCNQRVSLRYPSQG
PRVYLKEYFSRPPLQEKLGNLPEYVKRMDPVAAESYTLQNKMSSECIGPEAFYSMLSQSG
ASIQHLTKEWVANHYKWIIWKLASYERSYAEKFSGKLLNVSSVLEELQYRYEREVNHGHR
SLIKKMLDGDIPPSSMMVLCVSSILEDSDPQCGNQSVPQEGGYANASRIELTDGWYSVKA
LLDEQLSQKLASRKLFLGQKIRIWGAKLCGWLGPVSPFQASQTISLLLHINGTYRCHWAE
RLGLCKRAGDPLAFRCIKGNGGVVPSTLVGVTRTYPVLYRERLSNGSFVVRSERLEAKAL
QSYNQRRDLLAEGIMSAFQRDTEFDVGDDHEREEGAKLMKLLETAAEPEVLMAGMSSKQL
ASFASYKAKLEAKRQLEIQRSIEKAVEDAGLGERQTTPFLRLKVVGLMKKGQRECSPLKG
LITIWNPTQKQTLELREGQAYAVGGLVPSSSDSGILYLQTRGSTSDWLPLSYTMMEQYES
FFVPRSSTTISCLGEVPLSSEFDMAALVVYVGEVYRQGCQQKQWVFVTDGSAAIEGSPDV
LLAINFCLPYVEFDSSVPMNSSIAGSVVGFSNLIKRPRDQVNGLWVAEATENSDYFLSYD
HEVRQHLKDAAASVSKWATPSCLIVEKLKGRVMSIIRNSKNRHI
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcgaatattttccggtgaccggaacgatttccggtgggaaaccgccgat
caacagctccgcattgaagaattctccgacgctgtggctgaggacactcgtcgtctccct
tccatggccgatctactgcttctaggttcttcaaagatattggagaatgggaggagagat
gtggaggagcaaccgacttttcgaacgggattggggaaatctgtggaggtgaagcagtcg
tcaatcgcgagagcacgttctgttcttggcgaagtggattacacgttgactgattctggc
cactcggatggaagagaaaagggatttgctacatttagaccaatatctaacatgaactca
atggaatcagctgttatgtcaacttctgcatttcatagtgcatcagaaaatgttactcag
atatcaaattccatgtttcagacgggctcggggaaaacagtgaacatatcttcagctggc
ttgcttagggcaaaagctctgttaggcttagatggaacttatgatcaagaacagacagca
aaacagtcaatttctacagagctccttgcttcagacaatccatctcatttggagacccgg
aaactgggtaattttattctcagtagttcaaccagggttctagcatcttctaaagtgaag
tctattcctcgtgcaagtgaatccatgaagtttcctaaatgcatgaatgctgtttctgaa
cctccacaagttaaatttcaaactgctggtggaagatccatatcagtttccagcgatgca
ttagagcgagctaaaagcttgctaggaaaccttgaggttgattcatttttaaatgaagca
agcacagccgatccactattctcagtaattgatgggaaacccagtcgtttatcaaaccaa
aaaggtgactttaccacaccattactgcacaaagggatagaaaatagtgaccatcccttg
aaaatttttacatcttctcctaattcaagttcatacaagagaaactcatttggtaagtct
gagaggctagaaccaggacataacttgattgcacagtttgatgcggaggcggaactcaac
tcttctaaaaggccttataatggctttactggagatagaaagccccctaagaaaaattca
cactcaaacacggattgtttggaatatgcagttctgccaaaaagtgatccctcaaagagc
tcatccaacaaggctttggtggatatctcaaatactatgaatatagataataagcaatgt
tttggagaaaagagaagacttcgagggattagttctgtttcaccattcaagaagccccgg
agttcgtttgttaccccgttaaagaaaactaacttgtcagatattgatgttttgtctagg
ctagcaccaaaagagatcccgtgtaaccaaagggtttccttgagatacccttctcagggt
ccgcgggtttatcttaaagagtatttttcacggcctccacttcaggaaaagttgggtaac
ttgccagaatatgtgaagaggatggacccagttgctgctgaaagttatacactccagaac
aaaatgtcttcagaatgcattggacctgaagctttctactcaatgctatcacagtctgga
gcttctatccagcacttgaccaaagagtgggttgcgaatcactataagtggatcatttgg
aaattggcctcttatgagagaagctatgctgaaaaattttccggaaaacttttgaatgtc
tctagtgtgcttgaagaattacagtacaggtatgagagagaagtaaatcatggacatcga
tccttaatcaaaaaaatgttagatggtgacataccaccttcttcaatgatggtactttgc
gtttcctctatccttgaagattctgacccacagtgtggaaatcagtctgttccccaggaa
ggtggctatgctaatgcatccagaatagagttgactgatggatggtattctgtgaaagct
ctgttggatgaacagctatctcagaaacttgcttcaaggaagttatttctgggccagaag
attaggatctggggagccaaactgtgtgggtggcttgggcctgtttcaccctttcaggca
tcacagactataagtttgttattgcacataaatggtacatatagatgtcattgggctgaa
agattgggactgtgcaagcgtgctggtgatccattggcattcagatgtatcaaggggaat
ggaggggtggtccccagcactttggtgggggttacgaggacttatccagttctttacaga
gagaggttgagtaatgggagttttgtcgtgaggtctgagaggttggaagctaaagctttg
cagtcatacaaccagaggcgtgatcttcttgctgaaggaatcatgtcagcatttcaaagg
gatacagaatttgatgttggagatgaccatgaacgtgaagagggggctaagcttatgaag
ttacttgagacagctgctgagccagaggttctcatggctgggatgagctcaaaacaacta
gcttcttttgcttcttacaaagctaagttggaggcaaagaggcagttagaaatccaaaga
tcgattgagaaagctgtggaggatgctgggcttggggagagacagaccactccatttttg
cgtcttaaagtggttggtttgatgaaaaagggtcaaagagagtgtagtccactgaaaggc
ttgataacgatatggaatccaactcagaaacagacactagagctgcgtgaagggcaggca
tatgctgttggaggtcttgtgccatctagctccgattcaggcatcctttacttacaaaca
agaggatcaactagtgattggttacctttgtcctacacaatgatggaacaatatgagtca
tttttcgttccacgttcatcaactacaatatcatgtttgggagaagttcctctctccagt
gagtttgacatggcggctctcgttgtctatgtgggagaggtgtatagacaaggctgccag
caaaagcagtgggtatttgtgacagatggatccgcagctatagagggatcaccagatgta
ttgctggctatcaacttttgcttaccttatgttgaattcgactcatccgtgccaatgaac
tccagcattgctggatctgtggttgggttctctaatctcatcaagagacctagagatcaa
gtaaatggcttgtgggttgctgaagctacagaaaactcagattattttctaagttatgat
cacgaggttcgccaacatctcaaagatgctgctgcttcagtctcgaaatgggcaactccc
tcgtgcttgatagttgagaagctgaagggaagagtcatgtctattatcagaaattcaaaa
aatagacatatttaa
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