Salvia miltiorrhiza (redroot sage): 131023746
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Entry
131023746 CDS
T09291
Name
(RefSeq) nibrin homolog isoform X1
KO
K10867
nibrin
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131023746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131023746
03400 DNA repair and recombination proteins [BR:
smil03400
]
131023746
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
131023746
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
131023746
BRCA1-C complex
131023746
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
Nbs1_C
BRCT
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
131023746
NCBI-ProteinID:
XP_057809292
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Position
4:complement(45589891..45595856)
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AA seq
564 aa
AA seq
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MVWGLFPVDPLPGENEYYIFRKGTYKAGRKGCDVIINKDKGVSRVHAEIIVNEMVHMDHL
ENRNSNNNSEVQIRDCSKYGTFINRYRGTKEKVHEFPNKEATLEDGDVVAFGTGNARYRF
SYVPLVLCAPSSKPSEMNQLQTKMSMIGASVTQAWTSRCTHMVIDDFTPINDEIINSIVA
RKPLVRLCWIELIAGKTFCTEIPSSLSHAPTLLLEGASLKVADPQSREQCLKGYTFMLDS
THKYKFKEKLRLLLDAGGANVVYVETSDQCSQNTRDNLVCVMPAGMTSSSGNFKRFNALP
TVNEMELISAVVSGHLDPSVMASAPVLVTSSCSTDETVVADSDVETETATSVRTSAAVNL
LSSAEDECETKIGIHETEPLEKDCKAESFVHVIESTEHDSVANQEAGATEHGSQGFLPPK
PETLKHDSPYWCATSRDRDKGIMTRKDEGHLSDSENPNIIFSQSLIVRESNSTQFDHSSR
NGPVANFKRFRKMSAPSGNSFSNLIPFSQYPYKDSDFGNEDVAESIKEEKKRKQMEAIAD
DLFNNEKVCIVYAVFEKLISIKET
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcttatttcccgtagacccacttccaggtgaaaatgaatactatattttc
agaaaggggacatacaaagccggccgaaaaggatgtgatgtaatcatcaacaaagataaa
ggagtttcgagggtccatgctgaaattattgtaaatgaaatggttcacatggatcattta
gaaaatagaaattcaaataataactctgaagttcagattagagactgttcgaagtatgga
accttcatcaacagatatcggggtaccaaggaaaaagttcatgaatttccgaataaagaa
gcaacactggaggatggggatgtggttgcgtttgggactggaaatgcacgatataggttt
tcctatgttccccttgtgctttgcgcgccgtcatccaagccttcagagatgaatcaactt
caaaccaagatgtcgatgattggtgccagtgtcactcaagcttggacttctagatgcaca
catatggttattgatgacttcacccctatcaatgatgagattatcaattcgatcgtggct
agaaaaccgcttgtccgactctgttggatagagttaattgcaggaaagacattttgcact
gagattcccagctctctctcgcatgctcccaccttgttactggaaggcgcatctctcaaa
gtcgctgacccacaatctcgagagcagtgtttgaaaggatacacttttatgctagactcc
acgcacaagtataagtttaaggagaagttgcgtttgctattggatgctggtggtgcaaat
gttgtttatgtagaaacttcagaccaatgcagccagaataccagagacaatctggtgtgc
gtgatgccagctggaatgacaagcagtagcggaaattttaaaagattcaacgctctgcct
actgtgaatgagatggaattgatttcagctgttgtttctggacatctagatccttctgtt
atggcatcggcacctgtgctggtcacatcttcatgctccacagatgagacagtggttgca
gattctgatgtagaaacggaaactgccacatcagtccgtacatccgccgcagttaatttg
ctatcttctgctgaagatgaatgcgaaacaaagattgggatccacgagacagaacctctc
gaaaaagactgcaaagcagaaagttttgtccatgtgatagaatctaccgaacacgacagt
gtagcaaatcaagaggctggagcaactgaacatgggagccaaggattcttacctcctaaa
ccggaaacccttaaacatgacagtccttattggtgtgctacatcaagggatagagacaaa
ggtatcatgacgaggaaagatgaggggcatctatcagatagtgagaatcccaatataata
ttcagccagtctctaattgttcgagagtctaactcaacacaatttgatcattcttcaaga
aatggtccagttgcaaacttcaaacgtttcaggaagatgagtgctccatcggggaacagc
ttcagcaaccttattccgttttcacagtatccatacaaagattctgactttggaaatgaa
gatgtagctgagtccattaaagaggagaaaaaacgcaagcagatggaggctattgcagat
gacttatttaacaatgaaaaggtttgcatcgtgtatgctgtgttcgaaaaactcattagc
attaaagaaacataa
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