Salvia miltiorrhiza (redroot sage): 131023940
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Entry
131023940 CDS
T09291
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131023940
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
131023940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
131023940
NCBI-ProteinID:
XP_057809585
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Position
4:complement(48078670..48086516)
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AA seq
651 aa
AA seq
DB search
MEGNRRTFLNKHSNPQFKKTAGLRKGKQYNSIREEFSENFHSSDTVYRILCQSKKIGSVI
GKGGNIVKALREETEAKITVSDSVIGSDERVILICSPSDKQAKRQTACNDRQVERDVVEP
HCAAQDALLKVHDRIIEEDLGGPEKNNRSETVVSARLLVSNNLVGCLLGRKGDVIQRLRS
ETGANIRVLPADHLPACATSNDELVQISGKPAVVKKALYEISTLLHQNPWKDKPSLSYPT
NYAGQEFHPSGPPMRAMLPPENPHWLEHTMDAHRMHPMPFKGGYGLLPEDLDGVAPHDRE
APCEFTIKILCSAERIGSVIGKGGSNVKQLEQETGASIHVENASKESDERVIRVSSIEAL
WDQRSHTIDAILHLQNKTSEYSDDGTITTRLLVPSSKVGCILGQGGHVISDMRRRTHADI
RVFSKKEKPKCASEDEELVQISGSFGIAKDALVEIASRLRTRCLRDVNARGETASVRPLP
GFGPPDNFRGAGLPLSSTTIAGSSGRYEHIQDSVREFDSPRFPLPTRATGYMDFNEARIS
SLSGSAGSRISEFAATRGRHQDPYSTGPDFGASENYSSSRYIYQRPSSSAAPNNYPPPGG
YQGYESEHGMYPNHNVSPSPYRSSDRWTAAHHNSYTQQDPYQSIRGHGSYY
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaacagaagaacctttcttaataaacattctaatccacagttcaagaagaca
gcaggtctcaggaaaggaaagcaatataattctattcgtgaagaattttctgagaacttt
cattcatcagatactgtttaccgaattctttgccagtctaaaaagattggtagtgtaatt
ggaaaaggtggtaacatagtgaaagccctcagggaagagactgaagcaaagattactgtt
tctgactctgttattggctcagatgagagggtaatacttatttgtagtccttctgacaaa
caagcaaaaagacagactgcctgtaatgaccgacaagttgagagagacgtggtggagcca
cattgtgctgcccaagatgcactcctaaaagttcatgacaggattatcgaggaagatctt
ggtggaccagaaaaaaacaataggagtgaaactgttgtaagtgctcgacttttggtctca
aacaatttggttggatgtcttttaggaagaaaaggagatgtaatccaaagattacgtagt
gagactggtgcaaacatacgtgttcttcctgcagatcaccttcctgcttgtgctacgagc
aacgatgaactggtccaaatatcaggtaaacctgctgttgtgaagaaagctttgtatgaa
atatcaactctcttgcatcagaatccatggaaggacaaaccttctttaagttatcctaca
aactatgctggtcaagaatttcatccttctggtcctcccatgagagctatgcttcctcca
gaaaatcctcattggttagaacatactatggatgcccaccgtatgcatcctatgcctttc
aagggaggatatggacttctacctgaagatcttgatggtgttgcgccacatgatcgtgaa
gccccatgtgagttcactatcaaaatactctgctctgctgaaaggattggtagtgtgatt
ggcaagggaggctcgaatgtcaagcagttagagcaggaaacaggagctagcatccatgtt
gagaatgcatctaaagaatcagatgaaagagtaattcgtgtctcttcaattgaggcactt
tgggatcaaagatcacatactatcgatgccattcttcatcttcaaaataaaactagtgaa
tattctgacgatggaaccattacgactagacttcttgtcccttcaagtaaggttggctgc
attcttggacaaggcggccatgttattagtgatatgaggaggagaacacatgcagatata
cgtgttttttccaagaaagaaaagccaaaatgtgcatcagaagatgaagagctagtgcag
atctctggaagttttgggatagctaaagatgccttggtagagattgcatcaagacttaga
acaagatgtcttcgtgacgtaaatgctagaggggaaactgcttcagttaggccactacca
ggatttggcccaccagataattttcgtggtgccggcctccctctatcgagcactaccata
gctgggagctcaggaagatatgaacatatacaggacagtgttcgtgagtttgattctcca
agatttccgctgcctacacgagctactggttacatggatttcaatgaggctaggattagt
tctctatccggatcagcagggagccgcatctccgagtttgctgccacaagggggaggcac
caggatccatattcaactggtcctgattttggcgcttccgagaactacagttcctcgcga
tatatttaccagagaccttcctcttcggctgcacctaataactatcctccaccgggtggt
taccagggctatgaatcagagcatggtatgtatccaaatcataatgtgtctccatctccc
taccggagctctgatcgctggacagctgcccaccataatagctatacacaacaagatcca
tatcaaagcataagaggacatggttcttactactag
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