Salvia miltiorrhiza (redroot sage): 131025036
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Entry
131025036 CDS
T09291
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
smil04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131025036
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131025036
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
131025036
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131025036
03036 Chromosome and associated proteins [BR:
smil03036
]
131025036
Protein phosphatases and associated proteins [BR:
smil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131025036
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131025036
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131025036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
TAF6_C
TPR_TNPO3_IPO13_3rd
XMAP215_CLASP_TOG
HEAT_ULK4
Motif
Other DBs
NCBI-GeneID:
131025036
NCBI-ProteinID:
XP_057810606
LinkDB
All DBs
Position
5:complement(53411086..53418301)
Genome browser
AA seq
586 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLIDSFIPLVKRLAAGEWFTARVSACGLFHIAYPSASDVLKTELRSIYSQLCQDDMPMVR
RAAAANLGKFAATVEASPLKSDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLDPQDCVG
HILPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRIVNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDMISNPHYLYRMTVLRSISLLAPVMGSEITCSHLLPVIVTASKDRVPNIKFNVAKVLQS
MIPIVDHSVVEKSIRPSLVELAEDPDVDVRFFANQALQSIDHVMMS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtggacgagcctctatatccaatagcagtgctcatagatgagctcaagaat
gatgacattcaacttcggctaaactctatacgaagactatccaccattgcacgtgcactg
ggggaggaaagaactcgaaaagagttgataccatttctgagcgagaacaatgacgatgat
gatgaggtgctccttgctatggctgaagaattgggtgtattcattccatatgttggaggg
gtggagcatgctcatgttttgctccctccattggaaaccctatgtaccgtggaggagacg
tgtgtgagggataaagctgtagagtcattgtgcagaattggatcacagatgagggaaagt
gatttgattgattcttttattccacttgtgaagaggctggcagctggcgagtggtttaca
gctcgagtttcggcttgtggactatttcatattgcttaccctagtgcctcggatgtgtta
aagacagaattaagatcaatatatagccagttgtgtcaagatgatatgcctatggtcaga
agggctgctgcagcaaatttgggaaaatttgctgccactgttgaagcttctcctctcaaa
agcgacatcatgtccatgtttgaggatctgacgcaggatgatcaggattctgttcgcttg
ctagctgttgagggctgtgctgctcttgggaaattgttggaccctcaagattgtgttgga
catattctccccgtgattgttagcttctcacaggataagtcatggcgtgttcggtacatg
gttgccaaccaattgtatgagctttgtgaggctgtgggacctgaacctactaggacggat
ttggttcctgcgtatgtccgactacttcgagataatgaagcagaagtccggatcgcagct
gccggaaaagtgaccaagttctgtcggatagttaaccctgaacttgctatccaacatatt
cttccctgtgtaaaggagttgtcatctgattcttcacagcatgtaaggtctgctttggca
tccgtcataatggggatggctcccgttttagggaaggatgcaacaattgagcaacttctt
cccatatttctttcacttttgaaagatgaatttcccgatgttcgtctcaacatcatcagc
aaactagatcaagtcaatcaggttattggaattgatttactctcgcaatctttattacca
gctattgttgagctggcagaggataggcactggagagttcggctcgccatcatagaatat
atacctttattggctagtcagttgggtgttggattttttgatgacaaactaggtgccctt
tgcatgcagtggctacaggacaaggtttattccattagagatgctgcagctaataatttg
aaacgcctggcagaagaatttggtccagagtgggcaatgcagcatatcgttcctcaggtt
ttggatatgatcagcaatccccattatttgtaccggatgactgttcttcgttcaatttcc
ttgcttgctcccgttatgggttctgagatcacatgttctcacctgttgcctgttatagtc
actgcatcaaaggacagagtgcccaacatcaagtttaacgtggcaaaggtgttgcagtca
atgatccccatcgttgatcactctgtggtggagaaatcaatacgccccagcttagtagag
cttgctgaggaccctgatgtagatgtccgttttttcgctaatcaagcacttcagtcgatc
gatcatgtcatgatgagctaa
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