KEGG   Salvia miltiorrhiza (redroot sage): 131025039
Entry
131025039         CDS       T09291                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
smil  Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:smil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smil03041]
    131025039
Spliceosome [BR:smil03041]
 Complex B
  Other components
   Complex B specific factors
    131025039
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_NWD2_C Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 DUF7165 VPS8_N Beta-prop_LRRK2 Beta-prop_IFT122_2nd WD40_like zf_topless 7TMR-HDED Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 131025039
NCBI-ProteinID: XP_057810612
LinkDB
Position
5:complement(53503955..53511500)
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSNETFVADINSGRWDA
ILPQVAQLKLPRKKLEDLYEQIVLEMIELREIDTARAILRQTQVMGVMKQEQPERYLRLE
HLLVRTYFDPNEVYQDSTKEKRRAQIAQAVAAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDVEDMYPTTLGHAIKFGKNSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCL
RRLERAHGEGVTSVSFSRDGTQLLSTSFDTTARIHGMKSGKILKEFRGHSSYVNDAIFTA
DGSRIITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKT
SSIYIMTLQGQVVKSFSSGKREGGDFMAACVSTKGEWIYCVGEDRNLYCFSYQSGKLEHL
MKVHEKDVIGITHHPHINLIATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttcgacgctggaaatcgaagctcgagatgttatcaagattgtactccaattctgc
aaagagaattccctgcatcagacttttcaaacactgcagaatgagtgtcaggtttctcta
aatacagtggacagcaacgagacatttgttgctgatattaatagtgggaggtgggatgca
atcttgccacaagttgcccaacttaaacttccaaggaaaaaattagaagatctatatgag
cagattgttctggaaatgattgaacttcgggagattgatactgcccgtgcaattttaagg
caaacccaggtgatgggtgtcatgaaacaggagcaaccagagagatacttacgacttgag
catctactggttcggacttactttgacccaaatgaggtgtatcaagactctacaaaggag
aaaagacgtgctcaaatagcccaagctgttgcggctgaagtttcagtagttccaccttca
cgattgatggctttgattggtcaggctttaaaatggcagcagcatcaaggtttacttcca
cctggaacacaatttgacctgttccgaggtacggctgctatgaaacaagatgtagaagat
atgtaccctacgacccttgggcacgctataaagttcgggaagaacagtcaccctgagtgt
gctcgcttttctcctgatggtcaattccttgtttcttgttcagtcgatggattcattgag
gtctgggatcatataagtggaaaactgaagaaggatctccagtaccaagctgatgaaaca
tttatgatgcatgatgacgctgtcctgtgtgttgattttagtagagactctgagatgatt
gcatctggatcacaagatggaaaaataaaggtttggcgtatccgaactggtcagtgcttg
cgtaggcttgagcgcgcacatggtgaaggtgtcactagtgtcagcttttctcgagatgga
acccaattgttaagtacatcgtttgacaccactgctagaattcatggcatgaagtcaggg
aagatattgaaagagttccgtggtcattcatcttatgttaatgatgccatctttacagct
gatggctctcgtatcataactgcatccagtgattgcacggtgaaagtttgggatgtgaag
actacagattgtctgcagacgtttaagccaccacctccactacggggaggtgatgcgtct
gtgaattctgttcatcttttccctaagaatacagatcacatagttgtctgcaacaagaca
tcgtcaatatacatcatgacactccaagggcaggttgtgaaaagtttttcatccggtaaa
agagaaggaggggattttatggcagcttgtgtatcaaccaaaggagagtggatttattgt
gtcggcgaagacagaaatttatattgcttcagttatcaatctggcaagttagagcatcta
atgaaggtacatgagaaggatgtgattggcatcactcaccatccccacataaacctcatc
gccacctacggcgaagactgcaccatgaaattatggaagccataa

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