Entry
Name
KO
Organism
smil Salvia miltiorrhiza (redroot sage)
Pathway
Brite
KEGG Orthology (KO) [BR:smil00001 ]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131025216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:smil04121 ]
131025216
03400 DNA repair and recombination proteins [BR:smil03400 ]
131025216
Ubiquitin system [BR:smil04121 ]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
131025216
DNA repair and recombination proteins [BR:smil03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
131025216
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
5:complement(55507693..55511493)
Genome browser
AA seq
734 aa AA seq DB search
MSSGQKKRNFQIEAFKHKVVVDPKYAEKTWKVLEHAIHEIYNHNASGLSFEELYRNAYNM
VLHKYGEKLYSGLVSTMTFHLQTMSKSIEAAHGGSFLEELNSKWSDHNKALQMIRDILMY
MDRTFIPSTHKTPVHELGLNLWRDNVVHSDKIQTRLLNTLLELILRERTGEVINRGLMRN
IIKMLMDLGPSVYQEDFEKPFLDVSADFYRAESQEFIECSDCGDYLKKAERRLNEEIERV
SHYLDVKSEAKITNVVEKEMIANHMLGLVHMENSGLVKMLLDDQFEDLGRMYNLFRRVPN
GLSTIRDVMTSHIRDTGKQLVTDPEKSKNPVEFVECLLEKRDKYDKIISLAFGNDKTFQN
ALNSSFEHFINLNPRSPEYISLFVDDKLRKGLKGVKEEDIELILDKVMMLFRYLQEKDVF
EKYYKQHLAKRLLSGKTISDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFY
TAYGAELANGPTLVVQVLTTGSWPTQSSVTCNLPSEMLALCEKFRSYYLGTHTGRRLSWQ
TNMGTADLRATFGNGQKYELNVSTYQMCVLMLFNGADSLNYREIEQATEIPSSDLKRCLQ
SLACVKGKNVLRKEPMSKDIGEDDGFSVNDKFTSKLRKVKIGTVVAQKESEPEKQETRQR
VEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPGEIKKRIESLIERDFL
ERDNADRRLYRYLA
NT seq
2205 nt NT seq +upstream nt +downstream nt
atgagtagtggacagaagaagaggaattttcagattgaggcgttcaagcacaaagtagtg
gtggatccgaagtacgcagagaagacttggaaggttctagagcatgcaattcatgagatt
tataatcacaacgctagtggactgagcttcgaggagttatacagaaatgcttacaatatg
gtactacataaatatggggagaagctttattcaggacttgtgtcaacaatgacattccat
cttcagacaatgtccaaaagtatagaggctgcccatggtggttcgttccttgaggagctt
aacagtaaatggagtgatcacaataaagctttgcaaatgattcgcgacatattgatgtac
atggacagaactttcataccgagcacacacaaaactcctgttcatgagctcgggctaaat
ctttggagggacaatgtagtccactcggacaagatccagactaggttgctgaatacgctt
cttgaactgatacttagggagcgtaccggtgaagttatcaacagagggctgatgagaaac
ataatcaaaatgctgatggatttgggaccatcagtctaccaagaagattttgagaaaccg
tttcttgatgtttctgctgatttctacagagcagaatctcaggagtttatagagtgcagt
gattgtggggactatttgaagaaagctgaacggcgtttaaatgaagaaattgagagggta
tctcattacttggatgtgaaaagtgaagcaaagataaccaatgttgtggagaaagagatg
atagccaaccacatgctcggactagttcacatggagaattcaggcttggtaaagatgctt
cttgatgatcagtttgaggatttgggaaggatgtacaacttattccgccgggttcctaat
gggctctcaacgattagggatgtaatgacatcccacatcagagatactggcaaacagctt
gtcacggatcctgagaaatcaaagaatccagtggagttcgtggagtgcctgctcgagaag
agggataagtatgataagatcataagcttggcgtttggcaatgacaaaaccttccagaat
gctttgaattcttctttcgaacattttatcaatctgaatcctcgttctccagagtatata
tcattgtttgtggacgataaactgcggaaaggtctgaagggagtgaaagaagaggatata
gagctcattctagataaggtgatgatgctgttccgttacctccaggagaaagatgtcttt
gagaaatactataagcagcatttggcaaagagactgttgtcgggtaaaaccatatctgat
gatgccgagagaagtctcattgttaaactcaagactgaatgtggatatcagttcacttca
aaattagaaggcatgttcacagacatgaagacctctcaggacacgatgcaagggttttac
acagcctacggtgctgagttggccaacggacctacgttagttgtccaggttttgactacc
ggatcctggcccactcaatctagtgtcacctgcaacttgccatccgaaatgttggctctc
tgtgagaagttccgttcgtactaccttgggacccacactggtcggagattgtcgtggcaa
acgaatatgggcacggctgacctcagagctacctttgggaatggacagaagtatgagctg
aatgtttctacttatcagatgtgtgtcttgatgctgttcaacggtgccgattctctcaac
tacagggagattgagcaggccactgagatcccatcttctgatctcaagaggtgtctgcag
tcgttagcttgtgtgaaagggaaaaacgtgctgcgcaaagagcccatgagcaaggacatc
ggggaagatgacgggttctctgtcaacgacaagttcaccagcaagcttcgcaaggtgaag
atcgggactgtcgttgcacagaaggaatccgagcctgaaaagcaagagacgcgacagagg
gtggaggaggacaggaagccacagattgaagctgcaatagtcagaatcatgaaatcgcgg
agggtgttggatcataacaatatcatcgcagaggtcacgaagcaactgcagtcgcggttc
ctggcaaaccccggggagatcaagaaacggatcgagtccctcattgagcgagatttcttg
gagagggacaatgcagatagacgattataccgatacctggcctga