Salvia miltiorrhiza (redroot sage): 131026127
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Entry
131026127 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131026127 isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131026127
03460 Fanconi anemia pathway
131026127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131026127
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131026127
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
131026127
FA (Fanconi anemia) pathway
Downstream FA components
131026127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
Motif
Other DBs
NCBI-GeneID:
131026127
NCBI-ProteinID:
XP_057811883
LinkDB
All DBs
Position
1:complement(43928311..43940892)
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AA seq
735 aa
AA seq
DB search
MADSSTIYIGGIPVEFPYQPYGTQLAFMNQVIATLNRSQRDGHCHALLESPTGTGKSLSL
LCSALAWQQNHKLRNIRNESNYHGGGFIPETQPSGNPAGMEQQRLAPIIFYSSRTHAQIS
QVIREYKKTTYRVPMAVLGSRKHYCTNPKLLGDKKVDEKCRLLLKNREDYCPESRNVHEV
KGHPSLRKGGCHEVHDIEDLVKIGQVVKGCSYFAAHSLVEDAELVFCPYNYIINPNIRKG
LEVYMRGSIIILDEAHNIEDVARDGGSIDLEEESLLHLQIELRRLRLIDAMTYQPLFEMT
QDILSWMDRRKSALMKRDFGCHFRCWTGDKASKELQEANISLQNFPILQHCAQKAIRAAS
EAEPCVSYLTGMASAILEGLFSSLSYFFSRDGVHIRDFELALQRVAKKDEGTQGGWTNTF
SLWCLNPAVVFKSIAETAQSVILTSGTLSPMNTFSSELGVQFGTCLEAPHIIDVDSQVWA
TVISNGPGNYRLNASYKTADDYAFQDAVGTSLEEICKVVPGGCLVFFPSYKLLDKLSTRW
QETGQWSRLNAQKSIFVEPRGSSQDSFEATLREYYNYIRHGTRQSNSNLVIRKEGAAFLA
VCRGKVSEGMDFSDDNARAVVIVGIPFPNIYDIKVAQKKKFNNINEISKKLLSGNEWYCQ
QAFRALNQAAGRCIRHRLDYGAIIFLDERLHRERNRAYISKWLRKSLRLYTNFEESLHGL
KSFFRRCEGGGHNYM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccagcacaatctacatcggcggaatcccggtggagttcccgtaccagccg
tacggcactcagctggccttcatgaaccaagtgatcgcgacgctcaatcggtcgcagaga
gacggccactgccacgcgctgctcgaatctcccaccggcacagggaagtcgctctcgctg
ctctgctccgcccttgcatggcagcagaatcacaaacttagaaatatccggaatgagtcc
aactatcatgggggcggcttcatccctgagactcagccatcagggaatccagcaggcatg
gagcaacaaagattagcaccgattatcttttattcatcgagaactcatgctcaaatcagt
caagtcatccgggagtacaagaaaacaacctacagggtccccatggcagtcttgggatca
agaaagcattactgtaccaatccaaagttacttggtgataagaaagttgacgagaaatgt
cggttgcttctgaagaatagagaagattactgcccggaatccagaaatgtccatgaagtc
aaaggtcatccctctcttcgaaaaggtggctgccatgaggtccatgacattgaagatctt
gtcaaaattgggcaagttgtcaaaggctgttcatattttgcagcacattctttggttgaa
gatgcagaactggtcttctgcccatacaactatatcatcaatccaaacatccgaaaggga
ctggaagtttatatgcgcgggagcattattattttagatgaagcacataatatagaagac
gtagctcgtgatggtggtagtattgatctagaggaggaatctttgctccatttgcagata
gaattgagacggctgaggctgattgatgccatgacataccaacccttgtttgagatgact
caggacatattgagttggatggaccggagaaaaagtgccctgatgaagcgtgattttggg
tgccatttccgttgttggactggagataaagcttcaaaagagctacaggaagccaatata
tcattgcagaattttccaatattgcaacactgtgcccaaaaggccatcagagctgcttca
gaagcagagccatgtgtttcttatttaacaggaatggcatcagctatcctagaaggattg
ttctcttcactcagttacttcttctctagggatggtgtccatattcgtgactttgaactg
gcactacaaagagttgcaaagaaagatgaaggcacacaaggtggttggacaaacacattc
agcttgtggtgcttaaatcctgccgtcgtttttaaaagcattgctgaaactgcacaatct
gtcattctaacttcaggaactctttcaccaatgaatactttctcatctgaacttggtgtt
caatttggcacttgtctggaagccccacatatcatagatgttgattcgcaggtgtgggca
actgtgatttccaatggtcctggtaactatcgactcaacgcaagctacaaaactgcggat
gattatgctttccaggatgcagttggcacatctttggaggaaatatgcaaagttgttcct
ggtggttgtctggttttctttccaagctacaagttgctggataaattaagcaccaggtgg
caggaaacaggccagtggtctcgattaaatgcacaaaaatccatttttgttgaaccaaga
gggagcagccaagattcttttgaggctactctaagggaatactataattacatacgtcat
ggcacaaggcagtcgaatagcaatttggttattaggaaagaaggggcagcttttctagca
gtttgtcgaggcaaggtatctgaagggatggacttctcagatgacaatgctcgagctgtc
gtgattgttgggattccctttcctaacatttatgacattaaagttgcacagaagaagaag
ttcaataatataaatgagatatctaagaagcttttaagtgggaatgaatggtactgtcag
caagcctttcgtgccctaaaccaggctgcaggtcgttgcattcgacacaggttggattat
ggagctatcatcttcttagacgagcgactccatagagagagaaacagagcatacatatca
aagtggctgcgcaagtctcttaggctctacaccaactttgaggaatcacttcacggttta
aaatccttttttcggagatgtgaaggtggcggacacaattacatgtga
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