Salvia miltiorrhiza (redroot sage): 131026451
Help
Entry
131026451 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131026451
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131026451
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131026451
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131026451
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131026451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
PH_Rhabdo_glycop
Motif
Other DBs
NCBI-GeneID:
131026451
NCBI-ProteinID:
XP_057812302
LinkDB
All DBs
Position
5:31288332..31295348
Genome browser
AA seq
756 aa
AA seq
DB search
MGMLQMTWQSSLLKSLKRKHGSPPLGLRNLGNTCYLNSVLQCLTYTPPLANFCLRYLHSS
VCDFGTGKEKKGDCPFCILEKRIARSLSSEAVSDAPVKINSCLRIYAEHFRTGRQEDAHE
FLRYVIDACHNTCLRIKKLQHQQRGRNGTANGGDFAGAGETVVKEIFGGALQSQVKCLSC
GAESNKVDEIMDISLDILHSGSLREALQKFFQPEVLDGNNKYKCDNCKKLVAARKQMSIL
EAPNVLVIQLKRFEGIFGSKIDKPIAFDEILVLSSHMCKGSKDQQPEYNLFGTIVHSGFS
PDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFSRAKQRPRTRVDAVVNG
SKTHESNGNKISTMPKSGSADKSVCNKQISNHLQETNKSTNGSRSFIQKSGCVEKPFSMK
ISANHSETNRSNNFLATNGTKTLTCQRSDCVETPANMGDFSDNQPETCNITLLELNSCNS
TDGQIVGRCVKQVDVQESSNHHSQTSESGKSKIDHERPSQQRTFSDSGSTSKVLAPGNMR
IVVHKKEPGEENGHIAASPTSFKKERTGLMSDRNCMGKTSADIQSTGKGLSCLPLHNGNG
PMVVDSLERCLPEVNGSAHMTDSQKSLNCQDLPNGNIGASNNSCVKRKTEDDYSCIFFAK
DDQSRARVEAFKESIGKEASMILRSCGWSEEVRSFMHTTKKLCQETGNSALNDHERKCLL
VSQAKRTFLSKVPESLKAKLVERLKLFSQEKQLSGI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgctgcagatgacgtggcagtcgagccttctcaagtcgctgaagcggaagcac
ggctcgccgccgctagggctccggaacctcggcaatacctgctacctcaactccgtccta
cagtgcctcacctacacccctcccctcgctaatttctgccttcgctacctccactcctcc
gtttgtgactttgggacaggaaaggagaagaagggggattgtccattctgcatattagag
aaacgaattgctcgctctttgagtagtgaagcagtttcagatgcgcctgtaaagataaat
agctgtttgcggatttatgctgagcattttcgcactgggagacaagaagatgcacatgaa
tttttgcgttatgtgattgatgcatgccataatacatgcttaagaataaagaagttgcag
catcaacaacgggggaggaatgggactgccaatggtggtgattttgctggggctggagaa
acggtggtcaaggagatctttggaggggcgttgcagagtcaagtaaaatgtttgtcatgt
ggggctgagtcaaataaggttgatgagataatggatataagtctggatattttgcatagt
ggatcactccgagaagctttgcagaagttttttcagcctgaggtcttggatggaaataat
aagtataagtgtgataactgtaagaaattggtggcagcaaggaagcaaatgtcgattctc
gaggctccaaatgttcttgtaattcaattaaagaggtttgaaggtatatttggttcaaag
attgataagcccattgcatttgacgagatattggtgctgtcaagtcacatgtgcaaagga
agcaaggatcaacaacctgaatacaatctttttggtactattgtacattcaggtttctct
cctgattctgggcactactatgcatatatcaaggatgcgattggccgctggtactgctgc
aatgattcttatgtttcagtctcaaccctgcaagaggttttatcagaaaaagtgtatata
cttttcttctcccgtgcaaaacagaggccccggactcgggttgatgcagtggttaatgga
tctaagactcatgagtcaaatggcaataagatatcaacaatgccaaagtctggttctgca
gataaatctgtttgtaacaaacaaatttccaatcatctgcaagagaccaacaagtcaact
aatggcagtagatcctttatccagaagtcaggttgcgtagaaaagccatttagcatgaag
atttctgccaatcattctgagactaaccggtcaaataatttccttgcaaccaatggcact
aaaacacttacatgccaaaggtccgattgtgtggagacccctgctaatatgggagatttt
tctgataaccaaccggagacatgtaatatcactttacttgagttaaattcttgcaactca
actgatggacaaatagtcggtcgttgtgttaaacaagtagatgttcaagagtcttcaaac
caccacagtcagacaagtgaatcaggtaaatctaagattgatcatgagcgccctagtcag
cagagaacatttagtgactctgggagtaccagcaaggttcttgcccctgggaatatgagg
atcgtcgttcataagaaagagcctggggaggaaaatggacatatagcagcttcacctact
tcattcaaaaaggagagaactgggctgatgagtgacaggaattgtatgggcaaaacttca
gcagatattcagagtacagggaaagggctatcttgtttgcccctccataatggcaacggg
cctatggtggtggactccttagagagatgtttgcctgaagtaaatggatctgctcacatg
actgactcacaaaagagtcttaattgccaagacttacccaatggaaatattggggcctct
aacaactcatgtgtaaagaggaagacagaagatgattattcgtgcatcttttttgccaaa
gatgatcaatctcgtgcaagagtggaagcattcaaggaatcgattggaaaagaagcttcc
atgattctgcgttcatgtggatggtccgaggaagtgcgtagtttcatgcatacaacaaaa
aagttgtgtcaagaaactgggaattctgcactgaatgaccatgagaggaagtgcttactc
gtttcacaagcgaagagaacttttctttctaaggttccggaatcactgaaagcaaaacta
gttgaacgcctcaaattgtttagccaagagaaacaactatctggaatttaa
DBGET
integrated database retrieval system
