Salvia miltiorrhiza (redroot sage): 131026496
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Entry
131026496 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131026496 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131026496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131026496
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131026496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
GTP_EFTU_D3
Vps36-NZF-N
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
131026496
NCBI-ProteinID:
XP_057812345
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Position
5:complement(53317..59687)
Genome browser
AA seq
718 aa
AA seq
DB search
MPRKVNYGVDYDDGDDYEGYEDDYDYDEEVEENGLTAKTMPTKEVSETKVWRCPICTYDN
EDSMSACDICGVLRNPLVKSNIKTDNVAVGGMCKDSGVSVMAKSLFASLPQHMVKASVFE
VQNDVSSTDNHPNFHKFRNIRGTFPEFSSAFSYQNHKRVNIVPFKFDVPSPDDLVSSGLQ
SLKMKSKGSQKDTNIPVELDLAAKDQESTSASVTRERGNGVDEKDYGPTRGRKPGMSHSN
VNTEAMSSKTGKAEMTIERNTASVSEFIPETWMIPETVDGELSQLNLAIVGHVDSGKSTL
SGRLLHLSGRISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVGVAFFTSK
KYHIVLLDSPGHRDFVPNMISGATQADAAILVVDASLGSFEAGIDATGGQTREHAQLIRS
FGVDQIIVLVNKMDVVGYSKERFDFVKQKLGTFLRTCGFKESSISWVPASVMENQNLVAK
SSDARLSWYRGPFLMDAIDSLQLPARDYSKPLRLPICDVKSQSQSQVSACGKLESGAIRP
GLKVLVMPSKQIATARSLERDSQPCSIARAGDNVTVNLQGIEGNHVTAGSVICHPDYPVQ
VASQLEMKILVLEISTPIVIGSQLEFHIHHAKEAAKIVKILSLLDPKTGKVMKKSPRCLL
SKQHAMVEVGANFLMKNDITSVFVISLFQLLVILIIRSFASVYWLGIFSYILQLDFGY
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtgaattacggagttgattatgatgatggtgatgattatgaaggctat
gaagatgactatgattatgatgaagaagtggaagaaaatggtcttacagctaaaacgatg
cctacaaaagaagttagcgagactaaggtctggcgatgcccaatatgtacctatgataat
gaagatagtatgtctgcatgtgatatatgtggggttttacgtaaccctttggtcaagagc
aatatcaaaaccgataatgttgcagtgggcggcatgtgcaaagattctggagtatctgtg
atggccaagtctctttttgcatcattgccgcaacatatggtcaaagcatccgtctttgaa
gtgcagaatgatgtttcttccacggataaccaccctaacttccacaaattcagaaatata
cgaggcacttttccagaattcagtagtgcttttagttatcaaaatcataaaagagttaat
atagtccctttcaagtttgatgttccttctccagatgatttggtgtcaagtggactgcaa
tcactgaaaatgaaatccaaaggtagtcagaaggacacaaatattccagttgaactggac
ttggctgctaaggatcaagagtccacttcagcatcagtaacaagagagagaggtaatgga
gttgatgagaaagattatggtccaacccgtgggagaaaaccagggatgtctcatagcaat
gtgaatacggaagctatgtcttccaaaactggaaaagcagaaatgaccattgagagaaat
acagcatcagtttctgagtttattcctgagacatggatgatcccggaaacagttgatggt
gaattgagccagctaaatcttgcaattgttggccatgttgattccgggaagtcgacactt
tcaggaaggttgcttcatctatcgggacgaatatcgcagaaagagatgcacaaatatgaa
aaagaagctaaacaacagggaaaaggatcttttgcttatgcatgggcattagatgaaagt
gctgaagaaagggaaaggggtataacaatgacggtgggtgttgctttcttcacttccaaa
aaatatcacatcgtgctgcttgactcccctggacatagagattttgttccaaacatgatc
tcgggagcaacacaagcagatgctgcaattttagtggttgatgcttctttgggttcattt
gaagccggcatagatgctaccggggggcaaacgagggaacatgcacagctgattaggagc
ttcggagtagatcagattattgttcttgtcaacaaaatggatgtggtcggatactctaag
gaaagatttgattttgtgaagcagaaactagggacatttctccgtacttgtggttttaaa
gaatcttctatttcatgggttccagcaagtgtcatggaaaatcagaacttagttgcaaaa
tcttctgatgcacggttgtcctggtatagaggaccttttttgatggatgcgattgattct
ctccaacttcctgcaagagattactccaaaccactacgacttcctatttgtgatgttaag
tcacaatcccaaagtcaggtgtctgcatgtgggaaactggaaagtggagctattagacca
ggacttaaggtattggttatgccttcaaaacaaatagcaacagcccgctcgttggaacgt
gactctcagccttgtagtattgcaagagccggagacaacgttacagtgaatttgcaaggt
atcgagggcaatcatgtaacagctgggagtgtgatatgtcaccctgactacccggttcaa
gttgccagccagttggaaatgaaaattcttgtccttgagatttcaactccgattgtaatt
ggttctcagttggagtttcacatacaccacgcaaaagaggctgccaaaatcgtgaagata
ttgtctctgcttgatccaaagacagggaaagttatgaagaagtccccaagatgcttgctg
tccaagcagcatgccatggttgaggttggtgcaaactttctgatgaagaatgatattacg
agtgttttcgttattagtttatttcaattacttgttattttaattattaggtcttttgct
tcagtttactggctcggcatatttagttacattttgcagttggattttggatattga
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