Salvia miltiorrhiza (redroot sage): 131026528
Help
Entry
131026528 CDS
T09291
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131026528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smil04040
]
131026528
Ion channels [BR:
smil04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131026528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
131026528
NCBI-ProteinID:
XP_057812390
LinkDB
All DBs
Position
5:complement(188773..195790)
Genome browser
AA seq
769 aa
AA seq
DB search
MSASERDEIPMLPIASLKSDAGDDSGSRGLSTRTRSASMSIPSNSMDSTEYEPSLVGFTG
PLRNARRGPDTQMSGPLYANRNQEFVFQPPKGALRQKATEPKVDRTEKIGWPAEDYMGKN
EHLLRSGQLGMCNDPYCTTCPMYYNVKGRPKPSRTTEIFDAKFHNMLHGDGKGWAKRMWS
FLFPYIPGVMNPHTLFVQRWNQFFVIACSFAVFLDPMFFFLLTVQKESKCIILNGPMTTA
LVVLRSMTDFIYLLHILLQFRLAYVAPESRSAGSGDLVDDPKKIARNYLRGYFVVDFFVV
LPLPQIIILLLVPGSIGSSGANYAKNLLRAAILIQYIPRLWRFLPLVAGPSPTGFIFESP
WANFVINLLTFVLASHVVGSCWYLFGLQRVNQCFRDACGNSNMTKSDCMMFIDCGHGNVA
ERFKNYNDSWTIWKNNENATACFGKDGFDYGIYENAVNLTTYRSLVKRYVYSLFWGFQQI
STLAGNQVPSYFEWEVVFTMSIIGIGLLLFAWLIGNMQNFLQALGRRRLEMSLRRRDVEQ
WMSHRRFPEKLRSLVRDSERFTWAATRGVNEETLMENLPEDLQQDIRRHLFKFANNVRIF
QLLDEPIIDAIREKLKTKTYIKGSNIMVRGGLINKMVFIIRGKMVSEGEDGIQSSLSKGD
VCGEELLTWCLEHSSIIKDGKRGRIPGHRLLSNRKVTCLTNVEAFVLRGADLEEVTSHFA
RFLRSPRVEGAIRYESPYWRGLAARRIQVAWRYRKKRINRADSSSPPHN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttctgaaagagatgagatacctatgctaccaattgcaagcttaaagtcggat
gctggggatgactccggaagtagaggcttgtcaaccagaacgaggagtgcatcgatgtcc
atcccttcaaactccatggattctacagaatacgagccaagtcttgtgggtttcaccggt
cctttgagaaatgcaagacgaggtcctgacacgcagatgagcggccctttatatgcaaac
cgcaaccaggagtttgtctttcagcctcctaaaggtgcgctacgccaaaaagcaaccgag
cccaaagtagatcggactgaaaaaattggttggccagcagaggattatatgggtaaaaac
gagcatcttttgaggtcagggcagctggggatgtgcaacgatccatactgcacgacctgc
ccgatgtattacaatgttaaggggcgacccaagccttcaagaacaacggagatatttgat
gcaaagttccacaatatgttacatggagatggaaaaggttgggctaagagaatgtggtcc
tttctgtttccgtatattcccggagtcatgaacccccacacgctatttgttcagcggtgg
aaccagttcttcgtcattgcttgctcatttgcagtttttttggacccaatgttcttcttc
ctgttaaccgtgcagaaggagagcaagtgcataatactaaatgggccgatgacaacagca
ttggtcgtcttgaggagcatgactgacttcatttacttgctccatatcctccttcagttc
aggctagcttatgttgctcctgagtccagaagtgctggatctggtgatttagtcgatgac
cctaaaaagattgcccgtaattatctccgtggatactttgttgtcgatttcttcgttgta
ctgcctctgccacagattatcatattattgctcgtacctggctcaattggatcatctggc
gctaattatgcaaaaaatcttcttcgagcagcaatcctcatacagtatattccgaggctg
tggagattcttacctttggttgccggtccatctccaacgggcttcatctttgaatcaccc
tgggcaaattttgtcatcaatcttcttacctttgttttggcaagccatgtagtcggctcg
tgctggtatctctttggcctacagagggttaatcaatgtttccgagacgcttgtggtaac
agcaacatgacaaaatcggactgtatgatgttcatcgactgcggacacggaaatgttgcc
gagcggttcaagaattataatgattcatggacgatttggaagaacaatgagaatgcaact
gcatgtttcgggaaagatggttttgactacgggatttatgagaatgctgtcaatctaacc
acttacagaagcttagttaaaagatacgtgtactcgttgttttgggggttccagcaaatt
agtaccctggcggggaaccaagttccgagctacttcgagtgggaagttgtcttcaccatg
tcgatcatagggatcggtctcctgcttttcgcttggcttattggaaatatgcagaatttt
ctgcaggctcttggacgcaggaggttagaaatgtctctcaggcgccgtgatgtcgagcag
tggatgagtcatcgtcgatttcctgaaaaactacggagcctagttcgagattcggagcgc
ttcacttgggctgcaacgaggggcgtaaacgaagaaacgctgatggaaaacttgccggaa
gatcttcaacaagatataaggcgccatctcttcaagtttgccaataacgtccgaatcttc
caactactggacgaacctatcatagatgccatacgcgagaagctgaagacgaaaacatat
atcaaaggcagtaacatcatggttcgtggtggcctcattaacaaaatggttttcataatt
cggggaaagatggtgagcgagggagaagacgggattcaatcttccttgtccaaaggggat
gtctgcggagaagaacttcttacctggtgcctcgagcattcttcgattattaaagatggg
aaacgaggtaggatcccgggacatagattgttgagcaacaggaaggtaacgtgcttgaca
aacgtcgaagccttcgttctgcgcggtgctgatcttgaagaagtgacgagccacttcgcg
agattcttgagaagtccacgcgtcgagggtgccattaggtacgagtcgccctactggcgc
gggcttgcagcccgacgaatccaagtggcgtggaggtaccgaaagaagcgaataaatcgc
gcagactcctcaagcccaccgcataactag
DBGET
integrated database retrieval system
