Salvia miltiorrhiza (redroot sage): 131026582
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Entry
131026582 CDS
T09291
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131026582
03400 DNA repair and recombination proteins [BR:
smil03400
]
131026582
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
131026582
DNA replication proteins [BR:
smil03032
]
Prokaryotic type
DNA Topoisomerases
131026582
DNA repair and recombination proteins [BR:
smil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
131026582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
131026582
NCBI-ProteinID:
XP_057812458
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All DBs
Position
5:1633195..1645182
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AA seq
942 aa
AA seq
DB search
MSSHCIRPAAAHFALPKERMAFAAGLRLLRSHPLSFSSAAPPRLLLARRASDHRFLSAVN
PHQRRRLFAAKASSKDVEENGSVVALKDGGGEGGDGRVVVTELHKEATEAYLSYAMSVLL
GRALPDVRDGLKPVHRRILYAMHELGLASKKPHKKCARVVGEVLGKFHPHGDTAVYDSLV
RMAQDFSLRSPLIRGHGNFGSIDADPAAAMRYTECRLEALTEAMLLADLEQDTVDFVPNF
DNSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPDATLQELL
EYMPGPDFPTGGIIMGNIGILDAYRTGRGRVVVRGKTDIELLDPKSKRSAIIIKEIPYQT
NKASLVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRLTALQS
AFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKFKLTQAQDRYHIVEGIITGLD
NLDSIIDIIRKASNHASAATNLRREFNLTDKQAEAILDISLRKLTSLEKNKFIDEGRSLS
GQISKLQELLSSKKLILEMIEAEANEIKNKFSTPRRSMLEDSDSGQLEDIDVIPNEEILL
ALSEKGYLKRMRPDTFTLQHRGTIGKSVGKLRVNDAMSDFLVCRTHDHVLYFSDKGTVYC
ARAYKIPECSRTAAGTPLVQILSLSDGERVTSIIPVSEFEGDQYLVMLTMKGYIKKISLN
YFSSIRSTGIIAIQLVPGDELKWVRRCSNDDYVAMASQNGMVILCPCENMRALSRNTRGS
VAMRLKQGDKMASIDIIPASLGKKIEKGSETLSNHGKGFSGPWLLFISENGYGKRVPVAS
FRTSSLNRVGLKGYKFSAEDRLVAVFVVGFSVGEDGESDEQVVLVSQSGTVNRIKVRDIS
IQSRYARGVILMRLEHAGKIQSTSLISAAETEPEELEEEAAA
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcattgcatccgacctgcagcagcccatttcgcactccccaaggaacgcatg
gctttcgccgccgggctccgtttgctccgctctcacccactctcattctcttccgccgcg
ccgccgcgcctgctactagctcgacgcgcctccgaccaccgctttctctccgccgtgaac
ccccaccagcgccggaggttgttcgccgccaaggcttcctcgaaggatgtggaggagaac
gggagtgtggttgccttgaaggatggtggtggtgaaggaggcgatggtagggtagtggtc
acagagctgcacaaggaggcaacggaggcgtacttgtcgtatgccatgtctgtgctgctg
ggccgggcattgcccgatgttagagacgggctcaagcccgtccaccgcagaatattatat
gcaatgcacgagttgggcttagcatcaaagaaaccgcacaagaagtgtgctagagtagtt
ggtgaggttctagggaagttccatccacatggggatactgctgtctatgattcattggtt
cgaatggctcaggatttttccttgcgctctccactgattcgtgggcatgggaattttggc
tctattgatgcggatcctgctgcagcaatgcgttacacagagtgcaggctggaggcactc
acggaggccatgttattggcagatttggagcaagatacggttgattttgttccaaacttt
gataattcacaaaaagaaccatctctgcttcctgctcgcatccccaacttgctactaaat
ggttcttcagggattgcggttggaatggctaccaatattccaccgcataatcttggggag
ttggtagatgcactttccgtgctgattcacaatcccgatgcaacgttgcaagaattgctt
gagtacatgcctggacctgacttcccaactggaggaatcataatgggaaatattggtatt
ttggatgcatatcgaactggacgagggcgagtggtggtcagagggaagactgatatcgag
ttgctagatcccaagagcaagcgctcagcaattataataaaagagattccttatcagacc
aacaaagcttcccttgttgagaaaattgctgaactcgtggaaaataagagtttggaggga
ataagtgacatacgcgatgagagtgatcgatctgggatgcgcattgttattgagctcaag
agaggatcagaaccctccattgtcttgaataatctgtatcgtctcacggctctgcagtca
gcatttagctgtaacatggtggggattcttaatggccaaccgaagctaatggggttgaag
gaattgctccaggcatttttagattttagatgctccgtggttgaaaggcgtgcaaaattt
aaactaactcaagcacaagatcggtatcacattgtcgagggtattataacaggacttgat
aatctggacagtatcatcgacataatcaggaaagcttctaatcatgcatcggcagctact
aatctcagaagagagttcaacttgactgacaagcaagctgaagctatattggatataagc
ctcagaaagctaacatctctcgagaaaaataagtttattgatgagggaagatctttgtct
ggacaaatttcaaaactacaggagcttctttcaagcaaaaagttaatacttgagatgata
gaagcggaagcaaatgagataaagaacaaattttctactcctagacgttcaatgctggag
gactctgatagcggtcaacttgaggacatagatgttatacccaacgaagaaatcctactg
gcacttagtgaaaaaggctacctaaaaaggatgaggcctgatacgttcactcttcaacac
cgtgggactattggaaaatcggtagggaaattgagagtgaatgatgctatgtctgatttc
cttgtatgccgtacacacgatcatgtcctttacttcagtgataagggaactgtatattgt
gctcgtgcatataaaattcctgaatgcagcaggactgctgccggcacacctttagttcaa
attttatccctatctgatggtgagagggtcacttcaataattcctgtcagtgaatttgaa
ggagatcaatatcttgtgatgctcaccatgaaggggtatatcaagaaaatttctttgaac
tatttctcatcgataaggtcaactggaatcatagcaattcaactggttccaggtgatgag
ctgaagtgggtgaggcgttgctcgaatgatgattatgtggcaatggcatcacagaatgga
atggtgatcttgtgcccttgtgagaatatgagagcacttagtaggaataccagaggttca
gttgccatgaggctgaaacaaggggataagatggcgagcattgatataatacctgcatcc
ttgggaaagaagattgagaaaggctctgaaacactgtcgaaccatgggaaggggttttct
ggtccttggttgctgtttatatctgagaatggctacggaaaacgagttcctgtcgctagc
ttcagaacgtcatcactgaatagggttggtctgaaaggttacaagttttcggcagaagat
cgtctggtggctgtatttgtagtaggattctccgttggggaggatggagagagtgatgaa
caagtcgtgcttgtcagccaaagtggaacagtgaaccggatcaaagtacgggatatctcc
attcagtctcgctatgcaagaggtgtgatcctgatgcggcttgagcatgctggaaaaatc
caatcgacttctttaatatcggcagctgaaacagagcctgaggagctcgaggaggaggct
gcagcatga
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