Salvia miltiorrhiza (redroot sage): 14676046
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Entry
14676046 CDS
T09291
Symbol
rpoA, I565_pgp035
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
14676046 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
14676046 (rpoA)
03400 DNA repair and recombination proteins [BR:
smil03400
]
14676046 (rpoA)
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
14676046 (rpoA)
Transcription machinery [BR:
smil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
14676046 (rpoA)
DNA repair and recombination proteins [BR:
smil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
14676046 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-GeneID:
14676046
NCBI-ProteinID:
YP_007507143
UniProt:
M1FNS9
LinkDB
All DBs
Position
Pltd:complement(76592..77599)
Genome browser
AA seq
335 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSENVSHEYSTLTGIQESAHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTARD
IILPPYVEIVDNTQHIARLTEPINLHIGLEIERNRGYLRKMPQNFQDGSYPIDAVFMPVR
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRTLIDLFIPFLYKDEENLPLE
HNQHRVPLSPFTFHDKLNKVQKNKIALKSIFIDQSELSPRIYNCLIRSNIYTLLDLMNKS
QEDLMKIEHFRLGDVKGILDILEQHFAIFLPKKKF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agaacagacagtaaacgtctttattatggtcgatttattctggctccgcttatgaaagga
caagccgacacaatagggattgcgatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgtaaaatccgagaatgtctcccacgaatattcgactctaacaggtatt
caagaatcggcccacgaaattctaatgaatttgaaggaaattgtattgagaagtaatcta
tatggaacttgtgacgcgtctatttgtgttaggggtcctggatatgtaactgctcgagat
atcatcttaccaccttatgtagaaatcgtcgacaatacacaacatatagctagattgaca
gaaccaattaatttgcatattggattagaaattgagagaaatcgcggatatcttagaaag
atgccacagaactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aatgtgaatcatagtattcattcctatggaaatgggaatgaaaaacaagagatactgttt
ctcgaaatatggacaaatggcagtttaactccgaaagaagcacttcatgaagcctctcgg
actttgattgatttatttattccctttttatataaggacgaagaaaacttacctttagag
cacaatcaacatagggttcctttatccccctttacttttcacgataaattgaataaagtc
caaaaaaacaaaatagcattgaaatcgatttttattgatcaatccgaattgtctcctaga
atttataattgccttataaggtccaatatatatacattattggaccttatgaataagagt
caagaagatcttatgaaaattgagcattttcgcctaggagatgtaaaagggatattggac
attctagaacaacatttcgcaatttttttaccaaaaaagaaattttaa
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