Breviolum minutum: v1.2.033550.t1
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Entry
v1.2.033550.t1 CDS
T04349
Symbol
symbB.v1.2.033550.t1
Name
(OIST) -
KO
K15181
negative elongation factor C/D
Organism
smin
Breviolum minutum
Pathway
smin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
v1.2.033550.t1 (symbB.v1.2.033550.t1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smin03021
]
v1.2.033550.t1 (symbB.v1.2.033550.t1)
Transcription machinery [BR:
smin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
v1.2.033550.t1 (symbB.v1.2.033550.t1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TH1
Spt4
Motif
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MDQLLRGAIRNAVVTAPKSMIISYVSSRFRPHRVHLLPSLQMDQLLPGAMQRADEPDNVT
KPRKTLEAVDSVLGLRVAQTVHQYCKNASTFCNITMSQAAAQAMDMLTENYQGMPSICTM
AAGWIARLRAGKANADPLVEQRITLRGCLAKRMVYHFDPERADRLTNRSQPSPSVPWVPD
FINVKEWRETIYNLANESRGRSSRFVSGLLYEIGEAGKNFDELLTENSTSESFQLFTRKM
RELILRVLTVANMDETLVQDDLDALCATATHKQYTYVYSQGILRQLISMCPSQRQPLRCL
NQVLTEYHKENHSALRMDLRLSSVGQYPELSQLLHSMCRFGGSPHFDAKDVKDLCHKVEV
LIDKPDTKEEKKRKMEEAQVTARPSKRAKQEPKASPKKRKNEFLDLKDRANTGEMEEEGK
TEVASSADSWGHEKGTPRTPFSAKEAKGAKMTKNVAKTEVSSEASATERTSGRTSGRTAS
VFNMPAPSNYAREERDESDPTTGMRGVLETLRSSL
NT seq
2795 nt
NT seq
+upstream
nt +downstream
nt
tgctgacaaaagtacagggtgcgaaggggaggaaaacttacagggcattctctggcctcc
tgcatcaagacgtgctcggcgccctcgggctctgtgctgacaatagcacagggtgtgaac
tagagaaacacgtccgacggctagtcggaagcctcccatgaggctttgcatttcttgcaa
acgaaatgatcttgcgtttgcaagatcgattcttcaacttcattgcagggttcttgcctg
gcacactgctgctcggtcagtctcttgtcttggagtccaaaacttgcctcttcaaggctg
gcgttccgtttatcgaatactggatttgccaaatccattcatatttacaatgcagtgctc
tgcggcctggcaccttagtgcttggtaactgcgcgctgtttttgagctagtcgcaaatca
agggcgctagctctcacaactacatatatatannnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacagggggggcccctcctcccgcctcctgc
acctcgacgtgctcggcgccccccgggccctgtgctgacaaaagtacagggtgcgaaggg
gaggaaaacttacagggcattctctggcctcctgcatcaagacgtgctcggcgccctcgg
gctctgtgctgacaatagcacagggtgtgaactagagaaacacgtccgacggctagtcgg
aagcctcccatgaggctttgcattgtctatcttgcaaacgaaatgatcttgcgttagcaa
gatcgattcttcaacttcattgcagggttcttgcctggcacactgctgctcggtcagtct
cttgtcttggagtccaaaacttgcctcttcaaggctggcgttccgtttatcgaatactgg
atttgccaaatccattcatatttacaatgcagtgctctgcggcctggcaccttagtgctt
ggtaactgcgcgctgtctttgagctagtcgcaaatcaagggcgctagctctcacaactac
atatatatagattcaggccacagaccatgcatttgctgccatccttgcagatggatcagt
tgttacgtggggccattcggaacgcggtggtgacagctccgaagtccatgatcatctcat
atgtgtccagcagattcaggccacatcgtgtgcatttgctgccatccttgcagatggatc
agttgttacctggggccatgcagagggcggatgaaccggacaatgtgacgaagccacgca
agactttggaggcagtggattctgtacttggcctgcgtgtggcgcagacggtgcatcagt
actgcaagaacgcctccaccttttgcaacatcaccatgtctcaagctgcagcgcaggcca
tggacatgctgacggagaattaccaaggaatgccatcgatttgcaccatggctgctggct
ggattgctcgtttacgtgcgggaaaggccaatgcagacccgttggtggagcaacgcatca
cgcttcgcggctgtttggccaagcgcatggtgtatcatttcgatcctgaacgagcagatc
gtttgaccaaccgaagccaaccaagtccatcagtcccatgggtgcctgacttcatcaatg
tgaaggagtggagagaaaccatttacaacttggccaacgaaagccgaggacgatcttccc
gtttcgtctcagggctcctctatgagattggtgaggcgggcaagaactttgacgaactgc
tcacggagaattccacctcggaaagcttccagctgttcacccgcaagatgcgtgagttga
tcttgcgtgtcttaacggtggccaacatggacgaaaccttggttcaggatgatttggatg
ccttgtgcgcgacagccacacataagcagtacacctatgtgtattcgcaaggcattctca
ggcaattgatcagcatgtgcccttcacagcggcaacctttacgttgcctgaaccaggtcc
tcaccgaataccacaaagaaaaccattcagctttgaggatggatttgcgcttgagttcag
tggggcaatatccagaactgtcgcagttgctgcactcaatgtgtcgctttggtggcagcc
cacatttcgatgcaaaagatgtgaaagacctttgccacaaagtggaggtcttgattgaca
aaccagacacgaaggaagagaagaagcgaaagatggaggaagcacaggtgaccgcgcgac
catccaagcgtgcaaagcaggaaccaaaggcgagtccaaaaaagcgcaagaacgaattct
tggacctcaaggatcgtgcaaacactggagagatggaagaagaaggaaagacggaggtag
cttcctcagctgacagctggggacatgagaagggtacaccacgtacacctttctccgcaa
aggaagcgaagggagcgaagatgacgaagaacgtggccaagaccgaggtttcttccgagg
caagtgcaacggagaggaccagcggcaggactagtggcagaacagcatctgttttcaaca
tgccagcgcccagcaactatgcacgagaagagcgtgatgaatctgatccaacaacaggca
tgcgtggagtcttggagacactcagaagctccttg
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