KEGG   Breviolum minutum: v1.2.033550.t1
Entry
v1.2.033550.t1    CDS       T04349                                 
Symbol
symbB.v1.2.033550.t1
Name
(OIST) -
  KO
K15181  negative elongation factor C/D
Organism
smin  Breviolum minutum
Pathway
smin03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    v1.2.033550.t1 (symbB.v1.2.033550.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smin03021]
    v1.2.033550.t1 (symbB.v1.2.033550.t1)
Transcription machinery [BR:smin03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     v1.2.033550.t1 (symbB.v1.2.033550.t1)
SSDB
Motif
Pfam: TH1 Spt4
LinkDB
AA seq 515 aa
MDQLLRGAIRNAVVTAPKSMIISYVSSRFRPHRVHLLPSLQMDQLLPGAMQRADEPDNVT
KPRKTLEAVDSVLGLRVAQTVHQYCKNASTFCNITMSQAAAQAMDMLTENYQGMPSICTM
AAGWIARLRAGKANADPLVEQRITLRGCLAKRMVYHFDPERADRLTNRSQPSPSVPWVPD
FINVKEWRETIYNLANESRGRSSRFVSGLLYEIGEAGKNFDELLTENSTSESFQLFTRKM
RELILRVLTVANMDETLVQDDLDALCATATHKQYTYVYSQGILRQLISMCPSQRQPLRCL
NQVLTEYHKENHSALRMDLRLSSVGQYPELSQLLHSMCRFGGSPHFDAKDVKDLCHKVEV
LIDKPDTKEEKKRKMEEAQVTARPSKRAKQEPKASPKKRKNEFLDLKDRANTGEMEEEGK
TEVASSADSWGHEKGTPRTPFSAKEAKGAKMTKNVAKTEVSSEASATERTSGRTSGRTAS
VFNMPAPSNYAREERDESDPTTGMRGVLETLRSSL
NT seq 2795 nt   +upstreamnt  +downstreamnt
tgctgacaaaagtacagggtgcgaaggggaggaaaacttacagggcattctctggcctcc
tgcatcaagacgtgctcggcgccctcgggctctgtgctgacaatagcacagggtgtgaac
tagagaaacacgtccgacggctagtcggaagcctcccatgaggctttgcatttcttgcaa
acgaaatgatcttgcgtttgcaagatcgattcttcaacttcattgcagggttcttgcctg
gcacactgctgctcggtcagtctcttgtcttggagtccaaaacttgcctcttcaaggctg
gcgttccgtttatcgaatactggatttgccaaatccattcatatttacaatgcagtgctc
tgcggcctggcaccttagtgcttggtaactgcgcgctgtttttgagctagtcgcaaatca
agggcgctagctctcacaactacatatatatannnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacagggggggcccctcctcccgcctcctgc
acctcgacgtgctcggcgccccccgggccctgtgctgacaaaagtacagggtgcgaaggg
gaggaaaacttacagggcattctctggcctcctgcatcaagacgtgctcggcgccctcgg
gctctgtgctgacaatagcacagggtgtgaactagagaaacacgtccgacggctagtcgg
aagcctcccatgaggctttgcattgtctatcttgcaaacgaaatgatcttgcgttagcaa
gatcgattcttcaacttcattgcagggttcttgcctggcacactgctgctcggtcagtct
cttgtcttggagtccaaaacttgcctcttcaaggctggcgttccgtttatcgaatactgg
atttgccaaatccattcatatttacaatgcagtgctctgcggcctggcaccttagtgctt
ggtaactgcgcgctgtctttgagctagtcgcaaatcaagggcgctagctctcacaactac
atatatatagattcaggccacagaccatgcatttgctgccatccttgcagatggatcagt
tgttacgtggggccattcggaacgcggtggtgacagctccgaagtccatgatcatctcat
atgtgtccagcagattcaggccacatcgtgtgcatttgctgccatccttgcagatggatc
agttgttacctggggccatgcagagggcggatgaaccggacaatgtgacgaagccacgca
agactttggaggcagtggattctgtacttggcctgcgtgtggcgcagacggtgcatcagt
actgcaagaacgcctccaccttttgcaacatcaccatgtctcaagctgcagcgcaggcca
tggacatgctgacggagaattaccaaggaatgccatcgatttgcaccatggctgctggct
ggattgctcgtttacgtgcgggaaaggccaatgcagacccgttggtggagcaacgcatca
cgcttcgcggctgtttggccaagcgcatggtgtatcatttcgatcctgaacgagcagatc
gtttgaccaaccgaagccaaccaagtccatcagtcccatgggtgcctgacttcatcaatg
tgaaggagtggagagaaaccatttacaacttggccaacgaaagccgaggacgatcttccc
gtttcgtctcagggctcctctatgagattggtgaggcgggcaagaactttgacgaactgc
tcacggagaattccacctcggaaagcttccagctgttcacccgcaagatgcgtgagttga
tcttgcgtgtcttaacggtggccaacatggacgaaaccttggttcaggatgatttggatg
ccttgtgcgcgacagccacacataagcagtacacctatgtgtattcgcaaggcattctca
ggcaattgatcagcatgtgcccttcacagcggcaacctttacgttgcctgaaccaggtcc
tcaccgaataccacaaagaaaaccattcagctttgaggatggatttgcgcttgagttcag
tggggcaatatccagaactgtcgcagttgctgcactcaatgtgtcgctttggtggcagcc
cacatttcgatgcaaaagatgtgaaagacctttgccacaaagtggaggtcttgattgaca
aaccagacacgaaggaagagaagaagcgaaagatggaggaagcacaggtgaccgcgcgac
catccaagcgtgcaaagcaggaaccaaaggcgagtccaaaaaagcgcaagaacgaattct
tggacctcaaggatcgtgcaaacactggagagatggaagaagaaggaaagacggaggtag
cttcctcagctgacagctggggacatgagaagggtacaccacgtacacctttctccgcaa
aggaagcgaagggagcgaagatgacgaagaacgtggccaagaccgaggtttcttccgagg
caagtgcaacggagaggaccagcggcaggactagtggcagaacagcatctgttttcaaca
tgccagcgcccagcaactatgcacgagaagagcgtgatgaatctgatccaacaacaggca
tgcgtggagtcttggagacactcagaagctccttg

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