Sphaerotilus microaerophilus: CATMQ487_00690
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Entry
CATMQ487_00690 CDS
T10131
Symbol
pilR
Name
(GenBank) type 4 fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
smio Sphaerotilus microaerophilus
Pathway
smio02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CATMQ487_00690 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smio02022
]
CATMQ487_00690 (pilR)
02035 Bacterial motility proteins [BR:
smio02035
]
CATMQ487_00690 (pilR)
Two-component system [BR:
smio02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CATMQ487_00690 (pilR)
Bacterial motility proteins [BR:
smio02035
]
Pilus system
Twitching motility proteins
CATMQ487_00690 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
HTH_50
AAA_7
AAA_3
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
BDI03099
UniProt:
A0ABM7YFR9
LinkDB
All DBs
Position
81385..83016
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AA seq
543 aa
AA seq
DB search
MNVSAPPSILVVDDEPDLRTLYELSLLREGYDVETAGAVEEAWALLKDRRYQAVITDMRL
PDGTGLDLLRRLEQAGRSERSIVITAYGSPENAVQALKAGAYDYLTKPVDLKQFRAVVAA
ALGRTMSPRAAAAGEPAGTPTSAPAPLGRAPRRAVDGPDNALRRMAGHSAAMEQVRQLVE
KVARSMAPVLIQGESGTGKELVARSIHQVSARSAQPFIAVNCGAIPEQLLEAEFFGYRKG
AFTGAAEDRDGFFQAARGGTLFLDEIGDLPLSMQSKLLRAIQERAVRPVGAVVEVPLDVR
VISATHKDLAEEVPRGRFRQDLYYRLNVIEIRVPALRERCDDLPELCARVLERIAGDAGM
ANTPRLTPAALAHLGRYRFPGNVRELENLLHRAVALSGGPTIDVEDLGLPGARTAPDAAP
ATLSACSPEPGTPVDAGTAAGAGAGAGEPPRPHPSAPAASPSTAPAAPLPTDLVAYLDEV
EREVLARALERHRYNRTAAGAAMGLTLRQMRYRMARLGVHVAGDGVTLDDGEPSEAGDSG
GSE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcagcgcgccccccagcatcctggtcgtcgacgacgagcccgacctgcgcacc
ctctacgaactctccctgctgcgcgagggctatgacgtcgagactgcgggggcggtggag
gaggcctgggccctgctcaaggaccggcgctaccaggcggtgatcaccgacatgcggctg
cccgacggcaccgggctggacctgctgcgccgcctggagcaggccggccgcagcgagcgc
agcatcgtcatcaccgcctatggctcgcccgagaacgccgtgcaggccctcaaggcgggc
gcctacgactacctcaccaagccggtcgacctgaagcagttccgcgccgtcgtggccgcg
gccctcgggcgcacgatgtcgccccgcgcggcggccgccggcgagccggccggtaccccc
accagcgcaccggccccgctgggccgggcgccgcgccgcgcggtcgacggcccggacaac
gcgctgcgccgcatggcgggccactccgcggcgatggagcaggtgcgccagctggtcgag
aaggtggcgcgcagcatggcgccggtgctgatccagggcgaatccggcaccggcaaggag
ctggtggcgcgctcgatccaccaggtcagcgcccgcagtgcccagcccttcatcgcggtg
aactgcggcgccatccccgagcagctgctcgaagccgagttcttcggctaccgcaagggc
gccttcaccggcgcggcggaggaccgtgacggcttcttccaggccgcacgcggcggtacc
ctcttcctcgacgagattggcgacctgccgctgtcgatgcagagcaagctgctgcgcgcg
atccaggagcgcgccgtgcggccggtcggcgccgtggtcgaggtgccgctggacgtgcgc
gtcatcagcgccacccacaaggacctagccgaagaggtgccgcgcgggcgcttccgccag
gacctgtactaccggctgaacgtcatcgagatccgcgtgccggccctgcgcgagcgctgc
gacgacctgccggagctctgcgcgcgcgtgctggagcgcatcgcgggcgacgccggcatg
gccaacacgccccgcctcacgcccgccgcactggcgcacctggggcgctaccgcttcccg
ggcaacgtgcgcgagctggagaacctgctgcaccgcgcggtggccctgtcgggcgggccc
acgatcgacgtcgaggatctgggcctgcccggcgcacgcaccgcccccgacgcggccccg
gccaccttgtcggcctgctctcccgagcccggcacgcccgtggacgccggaactgcggcg
ggcgcaggggcaggggcaggggagcccccacgcccccatccgtccgcccctgccgcgtcg
ccatcgaccgcgccggccgcgccgctgccaaccgatctggtggcctacctcgacgaggtc
gagcgcgaggtgctggcgcgggcgctggaacgccaccgctacaaccgcaccgccgcgggc
gctgcgatgggcctgacgctgcggcagatgcgctaccgcatggcccggctgggcgtgcac
gtggcgggagacggggtgacactcgacgacggcgagccgagcgaggctggcgattcaggc
ggcagcgaatga
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