KEGG   Sphaerotilus microaerophilus: CATMQ487_02510
Entry
CATMQ487_02510    CDS       T10131                                 
Symbol
vapC_1
Name
(GenBank) ribonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
smio  Sphaerotilus microaerophilus
Brite
KEGG Orthology (KO) [BR:smio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smio03016]
    CATMQ487_02510 (vapC_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smio02048]
    CATMQ487_02510 (vapC_1)
Transfer RNA biogenesis [BR:smio03016]
 Prokaryotic type
  tRNA degradation factors
   CATMQ487_02510 (vapC_1)
Prokaryotic defense system [BR:smio02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    CATMQ487_02510 (vapC_1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BDI03281
UniProt: A0ABN6PHU9
LinkDB
Position
282264..282671
AA seq 135 aa
MNLTLLDTNICVYVIKARPAEVLARFNDFEAGELAVSVITALELTVGARRASHTAYARRV
EALLTQLEVLPLMAEVADAYATTRLDLQARGELIGPMDLLIAAHALSLNATLVTNNEREF
RRVAGLRVENWAQRR
NT seq 408 nt   +upstreamnt  +downstreamnt
gtgaacctgaccctgctggacacgaacatctgtgtctatgtgatcaaggcgcggccagcc
gaagtcctggcgcgcttcaacgacttcgaggcgggcgaactggcggtgtcggtgatcact
gcgctggagttgaccgtgggtgcgcgtcgcgcctctcacaccgcctatgccaggcgcgtg
gaggccctgctgacacaactcgaggtgctgccgctgatggcggaggtcgccgacgcctat
gcgaccacgcgcctggacttgcaggcgcgcggcgaactgatcggcccgatggacctgctg
atcgccgcccacgcgctcagcctgaacgcgacgctggtgacgaacaacgaacgggagttc
cgccgcgtcgcggggctgcgggtggagaactgggctcagcgccggtag

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