Sphaerotilus microaerophilus: CATMQ487_05330
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Entry
CATMQ487_05330 CDS
T10131
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smio Sphaerotilus microaerophilus
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smio03032
]
CATMQ487_05330 (topB)
Enzymes [BR:
smio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CATMQ487_05330 (topB)
DNA replication proteins [BR:
smio03032
]
Prokaryotic type
DNA Topoisomerases
CATMQ487_05330 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
BDI03563
LinkDB
All DBs
Position
587643..590246
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AA seq
867 aa
AA seq
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MSKSLVIAEKPSVAQDIVRALTPVAGKFEKHADHFENEQYIVTSAVGHLVEIRAPEAYDV
KRGKWSFAHLPVVPPHFELEPIDKGKARLSAVVKQIKRKDVTQLINACDAGREGELIFRL
IEQYALGAKSGAKPIQRLWLQSMTPQAIRDGFDKLRSDAEMMGLAQAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKHVSRPYWEIRADFGAAAGL
YEGKWFDPAFKKNEDAERRADRIWNEAEATAIADAVRGRTGTVTEEAKPSNQASPLLYDL
TTLQREANSRFGFSAKTTLSIAQALYEKHKVLTYPRTDARALPEDYVGVAKETLAMIADE
DLPGPLRALSGHARKALNDGYVKPSKRIFDNSKISDHFAIIPTLQAPKSLTEIEAKLYDL
VVKRFIAVFYPSAEFMVTTRITKVPTQLDGRPQELQFQTNGKVLVNPGWLAVYGKEAQDE
DANLVPVQPNEKVSVEEVRQAALKTKPPARYSEATLLSAMEGAGKLIDDEELKAAMQEKG
LGTPATRAQVIEGLILEKYMYREGRELIPTAKAFQLMTLLRGLAVEDLTKPELTGQWEHQ
LAQMEKGKLSRDEFMAGIAEMAQRIVKKAKEYDRDTIPGDYATLAAPCPNCGGVVKENYR
RFACAGKEGNAEGCGFSITKIPAGRSFELPEAEALLRDHQIGPLEGFRSKAGWPFTAELK
LVRDEEIRNWKLEFDFGDDAKKDEGDGEPVDFSGQASFGACPKCKGHVYEHGSNYVCEHA
VGAHATCDFKTGAVILQQPVSHEQMTQLLATGKTDLLDGFVSNKTKRKFKAFLVYDRKDG
KVIFEFEPRAARPAAKAPAKKAAAKPS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctggtcattgcagaaaaaccgtcggtcgcacaggacatcgtgcgcgcc
ctgaccccggtcgcgggcaaattcgagaagcacgccgaccacttcgaaaacgagcagtac
atcgtcacctccgccgtgggccacctggtggagatccgcgcgcccgaggcctacgacgtc
aagcgcggcaagtggagcttcgcccacctgcccgtggtgccaccgcacttcgagctcgaa
cccatcgacaagggcaaggcccggctgtcggcggtggtcaagcagatcaagcgcaaggac
gtgacgcagctgatcaacgcctgtgacgccgggcgcgagggtgagctgatcttccgcctg
attgagcagtacgcgctgggcgccaagagcggcgccaagccgatccagcgcctgtggctg
cagagcatgacgccgcaggccatccgcgacggcttcgacaagctgcgcagcgatgccgag
atgatgggcctggcccaggccgcgcgcagccgcagcgaggccgactggctggtgggcatc
aacggcacgcgggcgatgaccgcgttcaactcgcgcgacggcggcttcttcctgaccacc
gtcggccgggtgcagacgcccacgctgtccatcgtggtcgagcgcgaggagaagatccgc
aagcacgtctcgcggccctactgggagatccgtgccgacttcggcgccgccgccggcctc
tacgagggcaagtggttcgacccggccttcaagaagaacgaggatgccgagcgccgtgcc
gaccggatctggaacgaagccgaggctaccgccatcgccgacgcggtgcgtggccgcacc
ggcacggtcaccgaggaggccaagcccagcaaccaggccagcccgctgctgtatgacctg
accacgttgcagcgcgaggccaactcgcgcttcggcttttccgccaagaccacgctgtcg
atcgcgcaggcactgtacgagaagcataaggtgctgacctacccgcggacggacgcgcgc
gcgctgccggaggactacgtcggcgtggccaaggagacgctggccatgatcgcggacgag
gacctgccggggccgctgcgcgcgctgtccggccacgcccgcaaggcgctcaacgacggc
tacgtcaagcccagcaagcgcatcttcgacaacagcaagatcagcgaccacttcgccatc
atcccgacgctgcaggcgcccaagagcctgaccgagatcgaggccaagctctacgacctg
gtggtcaagcgcttcatcgcggtgttctacccgagcgccgagttcatggtcaccacccgc
atcaccaaggtgccgacccagctcgacggccgccctcaggagctgcagttccagaccaat
ggcaaggtgctggtcaacccgggctggctggccgtctacggcaaggaagcccaggacgag
gacgccaacctcgtgccggtgcagccgaacgagaaggtgtcggtcgaggaggtccgccag
gccgcactgaagaccaagccgccggcgcgctacagcgaggccacgctgctctccgcgatg
gagggcgccggcaagctcatcgatgacgaggagctcaaggccgcgatgcaggagaagggc
ctgggtacgccggccacgcgcgcgcaggtgatcgaaggcctgatcctcgagaagtacatg
taccgcgaggggcgcgagctgatccccacggccaaggccttccagctcatgacgctgctg
cgcggcctggcggtggaagacctgaccaagcccgagctgaccggccagtgggagcaccag
ctcgcgcagatggaaaagggcaagctcagccgcgacgagttcatggccggcatcgccgag
atggcgcagcgcatcgtcaagaaggccaaggagtacgaccgcgacaccatcccgggcgac
tacgccacgctggctgcgccctgccccaactgcggtggcgtggtgaaggagaactaccgc
cgcttcgcctgcgccggcaaggaaggcaacgccgagggctgcggcttctcgatcaccaag
atcccggccgggcgcagcttcgagctgcccgaggccgaggcgctgctgcgcgaccaccag
atcggcccgctggagggcttccgttccaaggcgggctggcccttcaccgccgagctgaag
ctggtgcgcgacgaggagatccgcaactggaagctcgagttcgacttcggcgacgacgcc
aagaaagacgagggcgatggcgagccggtggacttcagcggccaggccagcttcggcgcc
tgccccaagtgcaagggccacgtctacgagcacggcagcaactacgtctgcgagcacgcg
gtgggcgcgcacgccacctgcgacttcaagaccggcgcggtgatcctgcagcagcccgtc
agccacgagcagatgacccagctgctggccacgggcaagaccgacctgctggacggcttc
gtctccaacaagaccaagcgcaagttcaaggccttcctggtctacgaccggaaggacggc
aaggtgatcttcgagtttgaaccccgcgcggcccggccggcggccaaagcgcccgccaag
aaggcggcggccaagccgagctga
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