KEGG   Sphaerotilus microaerophilus: CATMQ487_10060
Entry
CATMQ487_10060    CDS       T10131                                 
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
smio  Sphaerotilus microaerophilus
Brite
KEGG Orthology (KO) [BR:smio00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smio02044]
    CATMQ487_10060
Secretion system [BR:smio02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   CATMQ487_10060
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 TniB
Other DBs
NCBI-ProteinID: BDI04036
UniProt: A0ABN6PG89
LinkDB
Position
complement(1160406..1162592)
AA seq 728 aa
MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYR
DARVILRYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYV
EPTPAYRLARRLEERLEFAPFPLSRLSKLTGWDVPFNPVRPLPPVGGLPRLHGIEPDEVD
VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRRNAAGEHEVVIVIDPKGDADLLKR
MYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF
AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK
LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE
KLTSGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKHGIDDGLPGASAGTRVPINVHADEFNELMGDEFVPLINKGGGAGLQVTAY
TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGAT
DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVALPKGQCFALLQGGQLWKVRMPLPAPD
PDEVMPQDLQQLAGYMRQSYSEATQWWEFTSSPALQDGALPDDLLDDAAAAEPGPVATDD
SAGNEASP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgtcggggaaacagccggtcgaggttctgcttcgcccagcggtggagctatataccgtc
gcggcgtgtgcaggcgccgcgtttctgtccctggtggccccgtggtcgctcgcgctgagc
cccgccatgggtgtcggcagcgcgctggcgttcggagcctatggcgcgatccgctaccgc
gatgcccgcgtcatcctgcgctaccggcgcaacatccgtcgcctgccgcgctacgtgatg
accagcaaggacgtgccggtcagccagcaacgtctgtttgtgggacgcggctttctgtgg
gagcagaaacacacccataggctcatgcagacgtaccggccagagtttcggcgctacgtc
gagccgacgccggcctatcggctggcccggcgcctggaggaacggctggagttcgcgccg
ttcccgctgtcccggctatcgaaactcaccggctgggacgtgcctttcaatccggtgcgg
ccgctgccgccagtgggcggcctgccgcgcctgcacggcatcgaacccgacgaggtggac
gtcagcctgccgctgggtgagcgcgtgggccactccttggttttgggaacgacaagggtg
ggcaaaacacgtttggccgaactcttcgtcactcaagacatccgccggaggaacgccgcg
ggcgaacacgaggtcgtgatcgtcatcgaccccaaaggagatgctgatctcctgaagcgg
atgtatgtcgaggccaagcgcgcgggccgcgaaggcgagttctatgtcttccatttgggg
tggccggacatttcggcacgctacaacgccgtaggccgattcggtcgcatctcggaagtc
gccacccgcatcgcggggcagctctccggcgaaggcaacagcgcagccttcagggaattc
gcgtggcgcttcgtcaacatcattgcccgcgccttggtggaactggggcagcgcccggac
tacatgctgatccagcggcacgtcatcaacatcgacgcgctgttcatcgagtacgcccag
cactacttcgccaagaccgagcccaaagcctgggaggtgatcgtccagatcgaggccaag
ctcaacgagaagaacatcccgcgcaacatgattgggcgcgagaagcgcgtggtggcgctg
gagcagtacctgtcacaagcccgcaactacgaccctgtgctggacggtttgcgctctgcc
gtgcggtacgacaagacgtatttcgacaagatcgtcgccagcctcttgcctctgctggaa
aagctcacgagcggcaagatcgcgcagctcctggccccgaactattccgacctggccgac
ccgcgcccgatcttcgattggatgcaggtcatccgaaagcgcgcagtcgtctatgtgggc
ctggacgcgctatccgatgccgaggtcgccgcagcggtcggcaactcgatgttcagcgat
ctcgtttcggtggcaggccatatctacaagcacgggatcgatgacggcctgccgggcgca
tcggctggcacgcgcgtgccgatcaacgtccacgcggatgaattcaatgaactgatgggt
gacgagttcgtgccgctgatcaacaaaggcggcggcgccggtctgcaggtcaccgcgtac
acgcagacgctttcggacatcgaggcccgtatcgggaaccgcgccaaagcgggtcaagtg
attggcaatttcaacaatctgttcatgctgagggtcagggagacggccaccgccgaactg
ctgacccggcaattgccgaaggtcgaggtctatacgaccaccatcgtctccggcgcgacc
gacagctcggacatccgcggcgcgacggacttcaccagcaacacgcaggaccgcatcagc
atgtccagcgtgccgatgatcgagccgtcgcacgtcgtcgccttacccaagggccaatgt
ttcgcattgttgcagggcggccagctttggaaggttcgcatgccgctgccggcaccggac
cccgatgaggtcatgccgcaggatctgcaacaactggcgggctacatgcgccagagctac
agcgaggccacgcagtggtgggagttcaccagttccccggcgttgcaggacggggccttg
cccgacgacctgctggatgatgccgctgcggccgaacctggcccggtggccaccgacgac
agcgccggcaatgaggcctcgccatga

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