KEGG   Sphaerotilus microaerophilus: CATMQ487_11190
Entry
CATMQ487_11190    CDS       T10131                                 
Symbol
vapC_4
Name
(GenBank) ribonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
smio  Sphaerotilus microaerophilus
Brite
KEGG Orthology (KO) [BR:smio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smio03016]
    CATMQ487_11190 (vapC_4)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smio02048]
    CATMQ487_11190 (vapC_4)
Transfer RNA biogenesis [BR:smio03016]
 Prokaryotic type
  tRNA degradation factors
   CATMQ487_11190 (vapC_4)
Prokaryotic defense system [BR:smio02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    CATMQ487_11190 (vapC_4)
SSDB
Motif
Pfam: PIN PQQ_syn_pqqF_N_2 EspA_EspE DUF5615 DUF5805
Other DBs
NCBI-ProteinID: BDI04149
UniProt: A0ABM7YIJ5
LinkDB
Position
1282429..1282851
AA seq 140 aa
MARTPEADRWMLDTNTASFIIRGASPGLKQRLRAIPLSDLRISAVTEGELLYGLARKPQA
TALKAAVHAFLQHVETLSWDSAAAQHYATLRARQEAAGRPLGGMDTMIAAHALAQNCILV
TNDQAFRRVDGLVVEDWLDG
NT seq 423 nt   +upstreamnt  +downstreamnt
atggcccgcacccctgaggccgaccggtggatgttggacacgaacacggccagcttcatc
atccgcggcgccagccccggcctgaagcagaggttgcgcgcgatcccgctcagtgacctg
cggatctccgcggtgacggaaggcgagttgctctacggcctggcgcgcaaaccgcaggcc
acggcgctgaaggctgccgtgcatgccttcctgcagcacgtcgagacgctgtcctgggac
agcgccgccgcccagcactacgcgaccttgcgtgccaggcaggaggcggccggccggccg
ctcggcggcatggacacgatgatcgcggcgcatgccctggcgcagaactgcatcctggtg
accaacgatcaggctttccggcgggtggacgggctggtggtggaggattggctggacggc
tga

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