Sphaerotilus microaerophilus: CATMQ487_12330
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Entry
CATMQ487_12330 CDS
T10131
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smio Sphaerotilus microaerophilus
Pathway
smio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CATMQ487_12330 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smio03019
]
CATMQ487_12330 (recQ)
03400 DNA repair and recombination proteins [BR:
smio03400
]
CATMQ487_12330 (recQ)
Enzymes [BR:
smio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATMQ487_12330 (recQ)
Messenger RNA biogenesis [BR:
smio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CATMQ487_12330 (recQ)
DNA repair and recombination proteins [BR:
smio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CATMQ487_12330 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
SelB-wing_2
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BDI04263
UniProt:
A0ABN6PK53
LinkDB
All DBs
Position
1398217..1400160
Genome browser
AA seq
647 aa
AA seq
DB search
MTPAAALDPAFPADADLGAARRVLADVFGYATFRGQQEAVVDHVVSGHDALVLMPTGAGK
SLCYQVPAIVRHRAGRGVTVVVSPLIALMHDQVGALEEVGVHAAFLNSSQGLDEAQQVER
ELLSGRLVLLYVAPERLMTPRLQGMLVSLHERGRLALFAIDEAHCVSQWGHDFREEYLQL
SVLHEQFPGVPRVALTATADDHTRADIVERLQLQAARLFISSFDRPNIRYTIVEKSDPKR
QLLRFIRDEHEGGDGHDSGIVYCGSRKKVEETAAWLNDEGIQALPYHAGLDADLRRRHQD
RFLRQESQDGGIVMVATIAFGMGIDKPDVRFVAHLDLPKNIEGYYQETGRAGRDGEPADA
WMTYGLADVVNQRRMIDESPAGEEYKRVQRSKLDALLTLAESPACRRVALLAYFGEESSP
CGNCDNCLHPPAIWDATEAARKLLSCIYRFQQHGQQRFGARSFGAGHLIDVLRGKTTDKV
SQYGHAELTTFGIGADLSEQQWRAVLRQLVAQGHVVAEGEYNTLTLADSARAVLKGEVRV
LLRQAPEAPSRRGGKGARGKSAGSRGAAEGQLDASAQARYAALKRWRAEIAREHSLPAYV
IFHDATLAEMARRQPGNPAELGEITGVGAKKLEAYGVEILRVLAAGD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgctgccgccctggaccctgccttccccgccgacgccgatctcggcgccgcc
cgccgcgtgctggccgacgtcttcggctacgccaccttccgcggccagcaggaggcggtg
gtggatcacgtcgtcagcggccatgacgcgctggtgctgatgcccaccggtgccggcaag
agcctgtgctaccaggtgcccgccatcgtgcgccatcgtgctggccggggcgtgacggtg
gttgtcagcccgctgatcgccctgatgcacgaccaggtcggcgcgctcgaagaggtgggc
gtgcacgccgccttcctgaactccagccagggcctggacgaggcccagcaggtcgagcgc
gagctgctctcgggccggctggtgctgctctacgtggcgcccgagcggctcatgacgccg
cgcctgcagggcatgctggtgtcgctgcacgagcgcggcaggctggcgctgttcgccatc
gacgaggcgcactgcgtcagccagtggggccacgacttccgcgaggagtacctgcagctg
tcggtgctgcatgagcagttcccgggcgtgccgcgggtggcgctgaccgccacggccgac
gaccacacccgcgccgacatcgtcgagcggctgcagttgcaggccgcgcgcctcttcatc
agcagcttcgaccggcccaacatccgctacaccatcgtcgagaagagcgacccgaagcgc
cagctgctgcgcttcatccgcgacgagcatgagggcggcgacggccacgacagcggcatc
gtctactgcggcagccgcaagaaggtcgaggagaccgccgcctggctgaacgacgagggc
atccaggcgctgccctaccacgccggcctggacgccgacctgcgccgccgccaccaggac
cgcttcctgcgccaggagtcgcaggacggcggcatcgtcatggtggccaccatcgccttc
ggcatgggcatcgacaagccggacgtgcgcttcgtcgcccacctggacctgcccaagaac
atcgagggctactaccaggagaccggccgcgccggccgcgacggggagcccgccgacgcc
tggatgacctacggcctggccgacgtggtcaaccagcgccgcatgatcgacgagagcccg
gcgggcgaagagtacaagcgcgtccagcgcagcaagctcgacgcgctgctcaccctggcc
gagtcgcccgcctgccgccgcgtggcgctgctggcctatttcggtgaagagagttcaccc
tgcgggaattgcgacaactgcctgcatccgccagcgatctgggatgccaccgaggcggcg
cgcaagctgctgagctgcatctatcgattccagcagcatggccagcagcgctttggcgcg
cgcagcttcggcgccgggcacctgatcgacgtgctgcgcggcaagaccaccgacaaggtc
agccagtacggccacgccgagctgaccaccttcggcatcggcgcggatctgagcgagcag
cagtggcgcgccgtgctgcgccagctcgtcgcccagggccacgtggtggccgagggcgaa
tacaacaccctcacactggccgacagcgcccgcgcggtgctcaagggcgaggtgcgggtg
ctgctgcgccaggcgccggaggccccatcgcgtcgaggcggcaagggcgcacgcggcaag
tcggcgggcagccggggcgcggccgaggggcagctggacgcctccgcccaggcgcgctac
gcggcgctcaagcgctggcgcgccgagatcgcccgcgagcacagcctgcccgcctacgtc
atcttccacgacgccaccctggccgagatggcccgccgccagccgggcaacccggccgag
ctgggcgagatcaccggcgtcggcgcgaagaagctggaagcctatggggtggagatcctg
cgggtgctggcggcgggggattga
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