Sphaerotilus microaerophilus: CATMQ487_12500
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Entry
CATMQ487_12500 CDS
T10131
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smio Sphaerotilus microaerophilus
Pathway
smio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CATMQ487_12500 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smio03019
]
CATMQ487_12500 (rppH)
Messenger RNA biogenesis [BR:
smio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CATMQ487_12500 (rppH)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
BDI04280
UniProt:
A0ABM7YIJ6
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All DBs
Position
complement(1418706..1419311)
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AA seq
201 aa
AA seq
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MLDREGFRPNVGIVLLNHRNQVFWGKRIRTHSWQFPQGGIKHGESPEQAMFRELHEEVGL
LPEHVRIIARTRDWLRYTVPEHFIRRDARGHYRGQKQIWFLLQLTGRDCDMNLRASDHPE
FDAWRWHDYWVPLDVVIEFKREVYQLALTELARYLPRNNPHNRFLRGSMRGPRRDEGAMN
GAADGPAEPAPAGLQGCAASE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgagaaggcttccggcccaacgtcggcatcgtcctgctcaaccatcggaac
caggttttctggggcaaacgcatacgcacccactcctggcagtttccgcaaggcggcatc
aagcacggtgagtcgcccgagcaggccatgttccgagagttgcacgaggaggtggggctg
ctgcccgagcacgtgcgcatcatcgcccgcacccgcgactggctgcgctacaccgtgccc
gagcacttcatccgccgcgatgcacgcggccactaccggggccagaagcagatctggttc
ctgctgcagctgacggggcgtgactgcgacatgaacctgcgcgcctccgaccacccggag
ttcgacgcctggcgttggcacgactactgggtgccgctggacgtggtgatcgagttcaag
cgcgaggtctaccagctggcgctcaccgagctggcccgctacctgccgcgcaacaacccg
cacaaccgcttcctgcgtggcagcatgcgcggaccgcgccgggatgagggtgccatgaac
ggcgccgcagacgggccagccgagccggcgccggccgggctgcagggctgcgccgccagc
gaatga
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