Sphaerotilus microaerophilus: CATMQ487_33390
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Entry
CATMQ487_33390 CDS
T10131
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smio Sphaerotilus microaerophilus
Pathway
smio03030
DNA replication
smio03430
Mismatch repair
smio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CATMQ487_33390
03430 Mismatch repair
CATMQ487_33390
03440 Homologous recombination
CATMQ487_33390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smio03032
]
CATMQ487_33390
03400 DNA repair and recombination proteins [BR:
smio03400
]
CATMQ487_33390
Enzymes [BR:
smio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CATMQ487_33390
DNA replication proteins [BR:
smio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CATMQ487_33390
DNA repair and recombination proteins [BR:
smio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CATMQ487_33390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DUF3646
DNA_pol3_tau_5
AAA_18
AAA_22
AAA_14
AAA_16
AAA_30
SKI
TsaE
Herpes_Helicase
Rad17
AAA_19
nSTAND3
AAA_28
AvrRpt-cleavage
Motif
Other DBs
NCBI-ProteinID:
BDI06369
UniProt:
A0ABM7YPH3
LinkDB
All DBs
Position
complement(3950669..3952756)
Genome browser
AA seq
695 aa
AA seq
DB search
MSYLVLARKYRPRSFAEMVGQEHVVQALGNALTHQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGVDGNGGITAQPCGVCPACRDIDAGRYVDYVELDAASNRGVDEISQLLDQAVYKP
VVGRFKVYMIDEVHMLTTTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVFEHLQTVLAAEAIEADAGSLRLLARAARGSMRDALSLTDQAIAFGAGRLEEG
AIRQMLGAVDRGHVVRILEAVAAGDGVALVRTADELRALGLSAAGTLEELATLAQQMAVL
QAVPSAVDPLDPDAATVQRVAGLLAPDETQLIYSVALHGRAELALAPDEYSGLVMVLLRL
LAFKPFGDGAGLPKASRDVAAMPSPAPAPAAAVAPAAAKPAPTPAAVSQDLRRPALPSAC
VAVPVSPAPVVQSPVAARPAYRVPAPVSTPVPAPAPVAMPVPEAAASPRPVPAAAARPAP
APVIRPVSAPAADSSSVPPWADWDEEDTSLPARSPGATAAPARLADDAEVSAASMPAPGP
VTGPVSGPVSGPVSGAEVDPVHVACTDRWLACCEQWFERNVLFGLVRELAWQAQCIAIDE
QADPPRWTLRVERESLRQGSHRDRLQEALSELLGRPAALDIVAGVVSDSAARRDAAAKAY
AQEEAESIIRNDPLVTELLARFAGARIVPGSIRPA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagctacctcgttctcgcccgcaagtaccggccgcgcagctttgccgagatggtcggg
caggagcacgtggtgcaggccctgggcaatgcgctgacgcaccagcgcctgcaccatgcc
tacctgttcaccggcacgcgcggcgtgggcaagaccaccgtctcgcgcatcctcgccaag
agcctgaactgcaccggcgtggacggcaatggcggcatcaccgcccagccctgcggggtc
tgcccggcctgccgcgacatcgatgcgggccgctacgtcgactatgtcgagctggacgcg
gcctccaaccgcggcgtcgacgagatcagccagctgctggaccaggcggtctacaagccg
gtggtgggccgcttcaaggtctacatgatcgatgaagtgcacatgctcaccacgacggcc
ttcaacgccatgttgaagacgctggaagagccgcccgagtacctgaagttcgtcctggcc
accaccgacccgcagaaggtgccggtcacggtgctcagccgctgcctgcagttcaacctg
cggccgatggcgcccgagacggtgttcgagcacctgcagacggtgctggcggccgaggcc
atcgaggccgatgccggctcgctgcgcctgctggcacgggccgcacgcggctccatgcgc
gatgcgctgtcgctcaccgaccaggcgatcgccttcggcgccggccggctggaggagggc
gcgatccgccagatgctgggcgcggtggaccgcggccatgtggtgcgcatcctggaggcg
gtggccgccggggacggcgtggcgctggtgcgcaccgccgacgagttgcgtgcactgggc
ctgtcggccgccggcacgctggaggagctggccacgctggcgcagcaaatggccgtgctg
caggcggtgccgtcggcggtcgatccgctcgaccccgatgccgccaccgtgcagcgcgtg
gccggcctgctggcgcctgacgagacccagctcatctacagcgtggccctgcacggccgt
gccgagctggcgctggcgcccgacgagtacagcggcctggtgatggtgctgctgcgcctg
ctggccttcaagccgttcggcgatggggctggcttgccgaaggcatcgcgcgatgtggcg
gcgatgccttcacccgcccccgcaccggcggcggctgttgcacctgcagcggcgaagcct
gcgcccaccccggcggcggtcagccaggatctgcgccggccggccctgcccagcgcctgc
gtggcggtgccggtgtccccggcgccggtggtccagagcccggtcgcagcccgtccggcc
taccgggtgcctgcgcctgtttccacgcctgttcccgcacctgctcccgtggccatgccg
gtgcctgaggcggcagcgtcgccacggcccgtgcccgcggcggctgctcggcctgcaccc
gcgcctgtgatccggccagtgagtgccccggcggcagacagcagctcggtgccgccctgg
gcagactgggacgaggaggacaccagcctcccggctcgctcgcctggcgccacggcggcg
ccagcgcggctggccgacgacgccgaggtctctgcggcgtcgatgccggcgcccggcccg
gtgaccggcccagtgagcggcccggtgagcggcccggtgagcggcgccgaggtcgacccc
gtccacgtcgcctgcaccgaccgctggctggcctgctgcgagcagtggttcgagcgcaat
gtgctgttcgggctggtgcgcgagctggcctggcaggcccagtgcatcgccatcgacgag
caagccgacccgccgcgctggaccctgcgggtggagcgcgagtcgctgcgccagggcagc
caccgcgaccggctgcaggaggcgctctccgaactgctgggccggccggccgcactggac
atcgtcgccggcgtggtgagcgacagcgcggcccgccgcgacgccgccgccaaggcctac
gcgcaggaggaggccgagtcgatcatccgcaatgatccgctcgtgaccgagctgctcgca
cgtttcgcgggggcgcgcatcgtgcccggctcgatccgccccgcctga
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