Sphaerotilus microaerophilus: CATMQ487_33450
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Entry
CATMQ487_33450 CDS
T10131
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smio Sphaerotilus microaerophilus
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smio03016
]
CATMQ487_33450 (truB)
Enzymes [BR:
smio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CATMQ487_33450 (truB)
Transfer RNA biogenesis [BR:
smio03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CATMQ487_33450 (truB)
Prokaryotic type
CATMQ487_33450 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF7595
Motif
Other DBs
NCBI-ProteinID:
BDI06375
UniProt:
A0ABM7YPF2
LinkDB
All DBs
Position
complement(3958424..3959500)
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AA seq
358 aa
AA seq
DB search
MSAEMTSATAAVTESADVQDAAVAARAATAAPRVRLPRRALHGVLLLDKPLGWTSNDALQ
KVKNLLRAEKAGHTGTLDPLATGLLPLCFGGATKFSQVSLEADKAYHATLRLGQRTEGGD
REGQVIEERPVATDRAAVEAACAALTGEIEQLPPMHSALKVQGRALYEYARAGQTVERMP
RRVTIHAIDIVDWQAERPETLVINVRCSKGTYIRTLAEDIGERLGCGAHLAALSRTGAGT
LSLAQAVTLDDLLGMDDEQRVALLRPVDVLLTDWPKVELSLADAGRFLSGMRRRVELADT
PRLRVYGPGGHAFLGSAHVTAGELISDRLLSPIEVEAQLLAAQAALNRSAASRGASAS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaaatgacgtccgccactgccgctgtcaccgaatctgccgacgtgcaggac
gctgccgtcgcagcgcgagccgccaccgcggcgccgcgggtgcgcctgccgcgccgcgcg
ttgcatggcgtgctgctgctggacaagccgctgggctggaccagcaacgacgcgctgcag
aaggtcaagaacctgctgcgcgccgaaaaggccggccacacgggcacgctggacccgctc
gccaccgggctgctgccgctgtgctttggcggcgcgaccaagttcagccaggtgagcctg
gaggccgacaaggcctaccacgcgaccctgcgcctgggccagcgcaccgaaggcggtgac
cgcgagggccaggtgatcgaggagcggccagtggccaccgaccgtgccgcggtcgaagcc
gcctgtgcggcgctgaccggcgagatcgagcagctgccgccgatgcattccgcgctgaag
gtgcagggccgtgcgctctacgagtacgcccgcgccgggcagacggtcgagcgcatgccg
cgccgggtgacgattcacgccatcgacatcgtcgactggcaggctgagcgccccgaaacc
ctggtgatcaacgtgcgttgcagcaagggcacctacatccgcacgctggccgaggacatc
ggcgagcggctgggctgcggtgcccacctggcggcgctcagccgcaccggcgctggcacg
ctctcactggcgcaggccgtgacgctggacgacctgctgggcatggacgacgagcagcgc
gtggcgctgctgcgcccggtggacgtgctgctgaccgactggccgaaagtggagctcagc
ctcgccgacgccgggcgcttcctgtcgggcatgcgccgccgggtcgagctggctgacacg
ccgcgcctgcgtgtctacggtccgggggggcatgccttcctgggcagcgcccacgtcacg
gccggcgagctgatctccgaccgcctcctcagccccatcgaagtcgaggcccagctgctt
gcagcccaggccgccctgaaccgcagcgccgcgtcccgcggcgccagcgcctcctga
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