Sphaerotilus microaerophilus: CATMQ487_47290
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Entry
CATMQ487_47290 CDS
T10131
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smio Sphaerotilus microaerophilus
Pathway
smio03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smio00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CATMQ487_47290 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smio03019
]
CATMQ487_47290 (orn)
03009 Ribosome biogenesis [BR:
smio03009
]
CATMQ487_47290 (orn)
Messenger RNA biogenesis [BR:
smio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CATMQ487_47290 (orn)
Ribosome biogenesis [BR:
smio03009
]
Eukaryotic type
Pre-60S particles
RNases
CATMQ487_47290 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BDI07759
UniProt:
A0ABM7YSY8
LinkDB
All DBs
Position
complement(5511884..5512459)
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AA seq
191 aa
AA seq
DB search
MTEPATPAAVLAKNDLNLIWLDMEMTGLEPATDRIIEVAVVVTDAQLQVRVEGPVIAVHQ
SDAVLDRMDAWNKGTHGKSGLIDRVRASALDEAAATAQIKAFLMQYVSARKSPMCGNSIC
QDRRFMANYMPELENFFHYRNLDVSTLKELARRWKPGIMDGFKKAQKHTALADIHESIDE
LLYYREHFLAA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgcgacccccgctgccgtgctggccaagaacgacctgaacctgatctgg
ctggacatggagatgaccggcctggagccggccaccgaccgcatcatcgaggtcgcggtg
gtcgtcaccgatgcgcagttgcaggtgcgcgtggaaggcccggtgatcgcggtgcaccag
agcgacgccgtgctcgatcgcatggacgcctggaacaagggcacccacggcaagagcggc
ctgatcgaccgcgtgcgtgcctcggccctcgacgaggccgccgccacggcacagatcaag
gccttcctgatgcagtacgtcagcgcgcgcaagtcgccgatgtgcggcaacagcatctgc
caggaccgccgcttcatggccaactacatgccggagctggagaacttcttccactaccgc
aacctggatgtctccacgctcaaggagctggcgcggcgctggaagcccggcatcatggat
ggcttcaagaaggcgcagaagcacaccgcgctggccgacatccacgagtccatcgacgag
ctgctctactaccgcgagcacttcctggcagcctga
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