Spiroplasma mirum ATCC 29335: SMM_0010
Help
Entry
SMM_0010 CDS
T03003
Symbol
holB
Name
(GenBank) putative DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
smir
Spiroplasma mirum ATCC 29335
Pathway
smir03030
DNA replication
smir03430
Mismatch repair
smir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMM_0010 (holB)
03430 Mismatch repair
SMM_0010 (holB)
03440 Homologous recombination
SMM_0010 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smir03032
]
SMM_0010 (holB)
03400 DNA repair and recombination proteins [BR:
smir03400
]
SMM_0010 (holB)
Enzymes [BR:
smir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMM_0010 (holB)
DNA replication proteins [BR:
smir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMM_0010 (holB)
DNA repair and recombination proteins [BR:
smir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMM_0010 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AHF60493
UniProt:
W0GN52
LinkDB
All DBs
Position
12599..13441
Genome browser
AA seq
280 aa
AA seq
DB search
MINNFAPADLKKLNILKEKINNNLLPNQLIISSNNITKLNEFAKLLSMFLVCEKERTFDC
DCANCVRIQNNTYYDLKAYGDFNTSIKKEEIQNIIEVFNYSALENKGVKIYIIKGGDLLT
LEAANALLKFLEEPTDNTYAIILSNQRNRIIETIKSRCLNIILTNDFNAVKDESDDAKQK
FVQAFFKNLVHQKNNNYILIRQLFDYTPINCYEYLSEIANVIKNNKWEQYNLDEKEILSL
LKPIKHHIIEECSSACNLLGGSFNKELILEQAIIKINQVV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgattaataattttgcaccagcagatttaaaaaaacttaatatcttaaaagaaaaaatt
aataataatcttttacctaatcaattaataatttcatcaaataatataacaaaattaaat
gaatttgctaaacttcttagtatgtttttagtttgtgaaaaagagcggacttttgattgt
gactgtgcaaattgtgttagaattcaaaacaatacttattatgatttaaaagcatatggt
gattttaatactagtattaaaaaagaagaaattcaaaatattattgaagtttttaattac
tctgctttagaaaacaaaggagtaaagatctatattattaaaggaggagacttactaact
ttagaagcggctaatgctttgttaaagtttttagaagaaccaaccgataatacatatgcc
attattttatctaatcaacgcaacagaattattgaaacaattaaatcacgatgcttaaat
attattttaacaaatgattttaatgcggttaaagatgagagtgatgatgccaaacaaaag
tttgtgcaagctttttttaaaaatcttgttcaccaaaaaaataacaattatattttaatt
cgccaattatttgattatacaccaattaactgttatgaatatttatctgaaattgctaat
gtcatcaagaataataagtgagaacaatataacctagatgaaaaagaaatactctcgtta
ttaaaaccaattaaacatcatattattgaagaatgttcttcagcatgtaatcttttaggg
ggaagttttaacaaggaattaattttagaacaagcaataattaaaattaaccaggtggta
taa
DBGET
integrated database retrieval system
