Spiroplasma mirum ATCC 29335: SMM_0162
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Entry
SMM_0162 CDS
T03003
Symbol
pnpT
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smir
Spiroplasma mirum ATCC 29335
Pathway
smir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMM_0162 (pnpT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smir03019
]
SMM_0162 (pnpT)
03016 Transfer RNA biogenesis [BR:
smir03016
]
SMM_0162 (pnpT)
Enzymes [BR:
smir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SMM_0162 (pnpT)
Messenger RNA biogenesis [BR:
smir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMM_0162 (pnpT)
Transfer RNA biogenesis [BR:
smir03016
]
Prokaryotic type
tRNA degradation factors
SMM_0162 (pnpT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
Thy1
SPATA25
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AHF60623
UniProt:
W0GNJ6
LinkDB
All DBs
Position
158344..160449
Genome browser
AA seq
701 aa
AA seq
DB search
MDKKVYETILNGRKLIVEYGQLAKQAAGSVLVRYGDTVVLVAVTVSDQASESDFFPLTVV
FQEKLYSVGKIPGGFLKREGKPSEYATLSARVIDRALRPLFSENFRNEVQVVINVLAVNN
DNDVRIAALFAASLAISISPIPFNGPIAGALVTIDNNGKIIINPTLDELNNGKMELIVAG
TRDAINMVEAGCQEISEDLVLAAILKGHDVVKELISFQDQIVQAVGKQKMQIELFSVRQE
IQDFVKANYQQALITSANIASKQERYHQIENINNAALMVYEEKQYKNEKEKKRVMLELNT
CLHNVVRDEVRRQITMDKKRLDGRKVDEIRSLTSEIDLLPVVHGSALFTRGETQVMTIVT
LGALGENQIIDGITDEEGKRFMHHYNFPPFSIGETRRMGSPSRREIGHGALGEKALAQII
PSEKVFPYTIRLVSEVLESNGSTSQASICASTLALMAAGVPISAPIAGIAMGLVMENDHY
TILTDIQGMEDHLGDMDFKVAGSEKGICALQMDIKITGISSEILQEALLAAKKARKVLLA
NMLATIATPRNHLAPTAPKMKTFMIPIDKIREVIGTGGKVISALIEKSDDVKIDIEDDGQ
VTIYHKNYESIEKAYQFIKDIVWPAAVGEEYEGKVVKIEKFGAFVNLKEGVDGLIHISKL
SDKHVGKTEKIVNLNDLVRVKVLEIDAKGKIKLGLVKIISK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagtttatgaaacaattttaaacggtcggaaattaattgttgaatatgga
caattagcaaaacaagcagcaggtagtgttttagtaagatatggtgatacagttgtctta
gtagcggttactgtaagtgatcaggctagtgaaagcgatttttttccgttaacagttgtt
tttcaagagaaattatattcggtgggaaaaattcctggcggttttttaaaacgggaagga
aaaccaagtgaatatgcaactttatcagcgcgagttatagaccgtgcgttacgtccgtta
ttttctgaaaattttcgtaacgaagtccaagttgttattaatgttttggccgttaataat
gataatgatgtgcgaattgcggcgttatttgctgcttcgttagcaatttcaatttctcca
attccatttaatggtccaattgcgggcgccttagtaacaattgataataatggtaaaata
ataattaatcctactttagatgaattaaacaatggcaaaatggaactaattgtagcggga
actagggatgcaattaatatggttgaagcaggttgccaagagattagtgaagatttagtg
ttagcagccattttaaaaggtcacgatgttgtgaaagaattaatatcatttcaagaccaa
attgttcaagcagtaggtaaacaaaaaatgcaaattgaattatttagtgtccgtcaagaa
attcaagattttgtaaaggctaattatcaacaggctttaattacctctgcaaatattgca
agtaagcaagaacgttatcatcaaattgaaaatattaataatgctgcattaatggtatat
gaagaaaaacaatataaaaatgaaaaagaaaaaaaacgggtaatgttagaattaaacact
tgcttacataatgttgttcgtgatgaagttcgtcgtcagatcacaatggataaaaaacgc
ttggatggtcgaaaagttgatgaaattcgcagtttaacaagtgaaattgatttattaccc
gttgttcatggaagtgctttatttacacgtggtgaaacacaggtaatgacaattgtgaca
ttaggagcattaggagaaaaccaaattattgatggtattacagatgaagaaggaaaacgt
tttatgcaccattataactttccgccattttcaattggtgaaacaaggagaatgggatca
ccctctcgccgagaaattggccacggagccctgggggaaaaagccttagcgcaaattatt
cctagtgaaaaagtctttccttatacaattcggttagtttccgaagttctggaatcaaat
ggaagtacttcgcaagcatcaatttgtgcatcgacgttagcgttgatggcggctggtgta
ccaattagcgctccaattgctggaatcgctatgggcttagtaatggaaaatgatcactat
actattttaactgatattcaagggatggaagatcacttaggtgacatggattttaaagtt
gctggtagtgaaaaaggaatttgtgctttacaaatggatattaaaattacggggattagt
tcagaaattttacaagaagcattactggcggctaaaaaagctcggaaagtattgttagcc
aatatgttagcaacaattgccactccacgtaatcatttagcaccaacagctccgaaaatg
aaaacctttatgattcccattgacaaaattagagaagttattggaacggggggtaaagtt
attagtgccttaattgaaaaatctgatgatgttaaaattgatattgaagatgatgggcaa
gttacgatttatcataaaaattatgaatcaattgaaaaagcataccaatttattaaagac
attgtgtggccagcagctgttggtgaagaatacgaaggtaaagttgttaaaattgaaaaa
tttggtgcttttgttaacttgaaagaaggcgttgatggtttaatccatatttcaaaactt
tctgataaacatgttggcaaaacagaaaagattgttaatttaaatgatttagtacgggtg
aaagtattagaaattgatgccaaaggaaaaattaaactaggattagtaaagattattagc
aaataa
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