Spiroplasma mirum ATCC 29335: SMM_0328
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Entry
SMM_0328 CDS
T03003
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase) component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
smir
Spiroplasma mirum ATCC 29335
Pathway
smir00010
Glycolysis / Gluconeogenesis
smir00020
Citrate cycle (TCA cycle)
smir00260
Glycine, serine and threonine metabolism
smir00280
Valine, leucine and isoleucine degradation
smir00620
Pyruvate metabolism
smir00630
Glyoxylate and dicarboxylate metabolism
smir00640
Propanoate metabolism
smir00670
One carbon pool by folate
smir00785
Lipoic acid metabolism
smir01100
Metabolic pathways
smir01110
Biosynthesis of secondary metabolites
smir01120
Microbial metabolism in diverse environments
smir01200
Carbon metabolism
smir01210
2-Oxocarboxylic acid metabolism
smir01240
Biosynthesis of cofactors
Module
smir_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SMM_0328 (lpdA)
00020 Citrate cycle (TCA cycle)
SMM_0328 (lpdA)
00620 Pyruvate metabolism
SMM_0328 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SMM_0328 (lpdA)
00640 Propanoate metabolism
SMM_0328 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMM_0328 (lpdA)
00280 Valine, leucine and isoleucine degradation
SMM_0328 (lpdA)
00310 Lysine degradation
SMM_0328 (lpdA)
00380 Tryptophan metabolism
SMM_0328 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SMM_0328 (lpdA)
00670 One carbon pool by folate
SMM_0328 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smir04147
]
SMM_0328 (lpdA)
Enzymes [BR:
smir01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SMM_0328 (lpdA)
Exosome [BR:
smir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SMM_0328 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
GIDA
HI0933_like
FAD_binding_2
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
DAO
Thi4
FAD_binding_3
3HCDH_N
Tri3
Motif
Other DBs
NCBI-ProteinID:
AHF60779
UniProt:
W0GQ80
LinkDB
All DBs
Position
304653..306038
Genome browser
AA seq
461 aa
AA seq
DB search
MDNKFDVIIVGAGPGGYVCAIKAAQEGLKTLIVEKEYYGGVCLNVGCIPTKALLKGAKVY
DMIQHADMYGIDIKNLTDVAPNWVKMQERKSKVVGQLTKGVEYLLKKNKVTLVKGKAKAL
DKNTIEVNGNKYTCDNLIIATGSVSRSLPLPGFDKATADGFVISSTEALSLPQIPKKLAV
IGGGVIGVEFACLYRRLGTEVTILQGLDTILEMLDKDVCEEMTKLLIKNKVKIETSVKIK
EIKGKTIIYDNKDGQEVKLATDYCLVSVGRVPVLTGFENIGLKIGDRKNIEVNDQCQTNL
PGVYAIGDVVGKAMLAHVASAQGIVAINNIKGYQDKIDYNKIPSCIYSHPEVAMVGLTEE
QAIKQNIQYKAFKFPLKANGKALADGETDGFVKILCEPKYGEILGAHIICATATDMISEI
TLCMEIEGTIYDLAKAVHPHPTLSEIIMEVAHGLEGHPIGI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggataataaatttgatgtaattattgttggagctggtccgggaggttatgtgtgtgct
attaaagcagcccaagaaggattaaaaactttaattgttgaaaaagaatactacggcgga
gtttgtttgaatgtcggatgcattccaaccaaagcgcttttaaaaggagcgaaagtttat
gatatgattcaacatgctgatatgtatggaattgatattaaaaacttaaccgatgttgct
ccgaactgagttaaaatgcaagaacgcaaatccaaagttgttggccagttaacaaaaggg
gttgaatacttattgaaaaaaaataaggttaccttagttaaagggaaagcaaaggctttg
gataaaaatacaattgaagtgaatggtaacaaatatacttgtgataatttaattattgca
acgggaagtgtttccagaagtttaccgctccctggttttgataaggcaactgccgatggt
tttgttattagttcaaccgaagcattatcattaccccaaattccaaaaaaattagccgtt
attgggggtggagttattggggttgaattcgcctgtctatatcgtcgtttaggaaccgaa
gtgactattttacaaggtttagatacaattttagaaatgttagataaagatgtttgcgaa
gaaatgactaaactactaattaaaaacaaagttaaaattgaaactagtgttaaaattaaa
gaaattaaagggaaaacaatcatttatgataacaaggatggtcaagaagttaaactagca
actgattattgtttagtatcagttggacgggttcctgtgttaactgggtttgaaaatatt
ggtttaaaaattggtgatcgtaaaaatattgaagtaaatgatcaatgtcaaactaatctc
cctggtgtttatgcaattggagatgttgttgggaaagcaatgctagcccatgttgcttcg
gcacaaggaattgtcgcaatcaataatattaagggttaccaagataaaattgattacaat
aaaattccatcatgtatatattcgcaccccgaagtagcgatggttggcttaactgaagaa
caagcaattaagcaaaatattcaatataaagcttttaaatttcctttaaaagcaaatgga
aaagccctggcggatggtgaaacagatggctttgttaaaattctttgtgaacctaaatat
ggtgaaattttaggagctcatattatttgtgcaactgcgacagatatgatttctgaaatt
accttatgtatggaaattgaaggaacaatttatgatttagcaaaagctgttcatccccac
ccaactttatccgaaattattatggaagttgctcatggtctggaaggtcatccaattggg
atttaa
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