Spiroplasma mirum ATCC 29335: SMM_0418
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Entry
SMM_0418 CDS
T03003
Symbol
varS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
smir
Spiroplasma mirum ATCC 29335
Pathway
smir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SMM_0418 (varS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smir01007
]
SMM_0418 (varS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smir03016
]
SMM_0418 (varS)
Enzymes [BR:
smir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SMM_0418 (varS)
Amino acid related enzymes [BR:
smir01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SMM_0418 (varS)
Transfer RNA biogenesis [BR:
smir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SMM_0418 (varS)
Prokaryotic type
SMM_0418 (varS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1f
Spore_Cse60
AP4E_app_platf
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
AHF60858
UniProt:
W0GP59
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All DBs
Position
391236..393878
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AA seq
880 aa
AA seq
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MKELFDKKYQPQIVEKDKYEFWKTNGYFTSDVNSPKPPFTIVIPPPNVTGKLHLGHAWDT
TLQDLIIRYKKLNGYDTLYLPGMDHAGIATQSKVEERLQTVNNILRHDLGREKFIEQVWD
WKEEYAEIIRSQWAKLGLALDYQKEQFTLNDNLSLAVRKVFSELYNKGLIYRGYRIIPWD
PHQQTALSNIEVIYKEVEGKMYYFKYFLENSTTEYLTIATTRPETMFADQCVIVNPQDER
YKKYWNKKVVNPANNELIPVICDDYVEMDFGTGAMKCTPAHDPNDYEIGIRHHLAMPICM
NLDGTMNKLTGKYQGQDRFTARSNLVADLTAQGLVVKIENHHHQVGFSERSDTIVEPYLS
KQWFVKMQPLATAVINLQNSAERVNFFPERFNHTLLTWMENIQDWCISRQLWWGHQIPVW
YHKNNETKIYVGVNPPSDLENWTQDEDVLDTWFSSALWPFTTLGWNWDEKLFNRYFPTNV
LVTGYDIIFFWVSRMMFQSLEFTNQKPFNDVLIHGLIRDEQGRKMSKSLGNGIDPMDVID
QYGADTLRHFLMTNSAPGQDLRYSQEKINASWNFINKLWNASRYVLLNLPTAFVPWSDFT
NEINQIINQHQENNIDSWILVNLTQTLHQVKENMDNYEFVLAGKELYDFVWNKYCSWYIE
LVKVNLNSNHQEVKEITLQTLYYVLKQILIMLHPFIPFVSEEIYQHLDLQPSIMLETYPN
VNFDYPVNFLNDVIMIIPAIRELRNEHNISRNQEIKIIINSQADYYEHLKTYQPAINEYL
KKLVNTEIIDVTYQLPMGDYISLPLSHYTLEVITAGLIDRTIEQEKLKQELVKLEQELKR
SRNILNNQNFLVKASPEKVKAEQEKYQQYLNQYEQIKGKL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattatttgataaaaaatatcaaccccaaatcgtggaaaaggataagtatgaa
ttttgaaaaacaaatggttattttaccagtgatgttaattcaccaaaaccaccatttacg
attgtaattcctccgccaaatgttactggtaagttacatttagggcatgcctgggataca
actttacaagatttaattattcgttataaaaaattaaatgggtatgatactttgtattta
ccaggaatggaccatgcgggaattgcgacccaaagtaaagttgaagagcggttacaaaca
gttaataatattttacgccatgatttaggtcgcgaaaaatttattgaacaagtttgagat
tgaaaagaagaatacgccgaaattattcgtagtcaatgggcaaaattaggattagcgtta
gactatcaaaaagaacagtttaccttaaatgataatttatcattagcagtgcgcaaagtt
tttagtgagttatataataaaggtttaatttaccgtggttatcggattattccgtgagat
ccccatcaacaaacagcgctttcaaatattgaagttatttataaagaagtggaaggaaag
atgtattattttaaatacttcttagaaaacagtaccactgaatatttaacgattgccaca
actcgtcccgaaacaatgtttgcagaccagtgcgttattgttaatcctcaggatgagcgt
tataaaaaatattgaaataaaaaagttgtgaatccagctaataatgaattaatcccagtc
atttgtgatgattatgtcgaaatggactttggaactggcgctatgaaatgtactccggct
catgatcctaatgactatgaaattggcattcgccatcatttagcaatgccaatttgtatg
aacttagatggtactatgaataaactaacaggaaaatatcaaggtcaggatcgttttaca
gcacgcagtaatttagtagctgatttaactgcgcaaggtttagttgttaaaattgaaaat
catcaccaccaagttggtttttcagaacgcagtgatacgattgttgaaccatatttatca
aaacaatgatttgttaaaatgcaaccattagcaacggcggttattaatttacaaaatagt
gcggagcgagttaattttttccccgaacggtttaatcatactttgttaacctgaatggaa
aatattcaagattggtgtatttcgcgccagctatgatgaggtcatcaaattccagtgtgg
taccacaaaaacaatgaaacgaaaatttatgttggtgttaatccacccagtgatttagaa
aactgaacccaggatgaagatgttttagatacctggttttcttccgcattatggcctttt
actaccttaggatgaaattgggatgaaaaattattcaaccgttatttcccaactaatgtc
ttagtaactggttatgatattattttcttttgagtatcacgaatgatgtttcaatcacta
gaatttactaatcaaaaaccatttaatgatgttttaattcatgggttaattcgcgatgaa
caaggacgaaaaatgagtaaatcattagggaacggcattgatccaatggatgtgattgac
caatacggagctgatactctgcgccatttcttaatgaccaatagcgcccccggtcaagat
ttacgttattcacaagaaaaaattaacgcttcatggaattttattaataagttatgaaat
gcttcacgctatgtactattaaacttaccaactgcttttgttccgtggtcagattttacc
aacgagattaatcaaattattaatcagcaccaagaaaataatattgatagttgaattctt
gttaatttaacacaaaccttacatcaggttaaagaaaatatggataactatgagtttgta
ttagctggcaaagaattatatgattttgtgtgaaataaatattgctcatggtatattgaa
ctagtaaaagttaatttaaatagtaatcatcaagaagttaaagaaattaccttgcaaact
ttatactatgttttaaaacaaattttaattatgttgcatcctttcattccgtttgttagt
gaagagatttaccaacatttagatttacaaccatcaattatgttagaaacatatcccaat
gttaactttgattatccggttaattttttgaacgatgttattatgattattcctgcaatt
cgtgagttacgtaatgagcataatattagtcgaaaccaagaaattaaaattattattaat
tcccaagctgattattatgaacatttaaaaacttaccaaccagctattaatgaatattta
aaaaaattagttaataccgaaatcattgatgttacttatcaactaccaatgggggattat
atttccttaccattatcccactatactttagaagttatcacggctggtttaattgaccgc
actatagaacaagaaaaattaaaacaagaattagttaaattagagcaagaacttaaacgt
agtcgcaatattttaaataatcaaaatttcttagtcaaagcatctcctgaaaaggttaaa
gccgaacaagaaaaatatcaacaatatttaaatcaatatgaacaaatcaaaggaaaactt
taa
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