KEGG   Spiroplasma mirum ATCC 29335: SMM_0831
Entry
SMM_0831          CDS       T03003                                 
Name
(GenBank) hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
smir  Spiroplasma mirum ATCC 29335
Pathway
smir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMM_0831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smir03019]
    SMM_0831
Messenger RNA biogenesis [BR:smir03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SMM_0831
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 dUTPase KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: AHF61230
UniProt: W0GLV8
LinkDB
Position
complement(791425..792954)
AA seq 509 aa
MPVYGWVILLGACALIFYLIGYLVEKYLHFKLIKNTEKKIKEAELTAKKIINAAKADAKV
EAAQIRQDVREEVAQKRAEILENENFFKEREKNIIIREEVLTQKEQELFYKREELQKLLA
KYDGLINNTIQQLEQIAGFSQDQAKDILFKEINVKYQKQIGEFLKNAEVNVRLKAKETAV
NIITQAIERYSADVVVEKTTVVINLADDNMKGRIIGKNGRNIKTFETTAGVDLIIDDTPN
IIQVSSFNPIRREIAKKALERLITDGRIQPNKIEEAIRLEKTDLDTTILQTGKDTILELG
IYNIDLELIRYIGMLKYRTSYGQNVLMHSIEVAKLAGIMASELGLDPEIAIRAGLLHDIG
KAVDFENEGSHVTLGVQLATKYKESRIVINAIHSHHGEVPMDNPYSPLVAAADTLSAARP
GGRNNNVENYISRMKELEQMCMEVRGVAKAYALQAGRQIRVIVNPERTTDIQAQKIAFDI
REKISHNKIVPGDIVITVIRELRFIETVI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgccagtttatggatgagtaatattattaggcgcttgtgccttaatattttatttaatt
ggatatttagttgaaaagtatctacattttaaattaattaaaaatactgagaaaaaaatt
aaagaagcagaactaactgcaaaaaaaattattaatgcggcgaaagcagatgcaaaagtt
gaagctgctcaaattagacaagatgttcgcgaagaagtcgcacaaaaacgagcagaaatt
ttagaaaatgaaaatttttttaaagaacgtgaaaaaaatattattataagagaagaagta
ttgacgcaaaaagaacaggagttattttataaaagagaggaattacaaaagttattagct
aaatatgacggtttaatcaataatacaatccagcaattagaacaaattgcagggttttcg
caagatcaagcgaaagatattttatttaaagaaattaatgttaaatatcaaaaacaaatt
ggggaatttttaaaaaatgccgaagtaaacgtccggttaaaagcaaaagaaacggctgtt
aatattattactcaggctattgaacgatattcagcggatgtggttgttgaaaaaacaacc
gtggttattaatttagctgatgataatatgaagggaagaattattggaaaaaatggaaga
aatattaaaacttttgaaacaaccgcgggtgttgatttaattattgatgatactcctaat
attattcaggtttcttctttcaatcccattcggcgtgaaattgctaaaaaagctttggaa
cgattaattacggatggtcgaattcaaccgaataaaattgaagaagcaattcgcttagaa
aaaactgatcttgatacaacaattttacaaactggaaaagataccattttagaactagga
atttataatattgatttagaactaattcgttatattggaatgctaaaataccgcactagt
tatggccaaaatgttttaatgcattcgattgaagttgctaagttagccggtattatggca
agtgaattaggacttgatccggaaattgcgattcgggcaggattattacatgatattggg
aaagcagttgattttgaaaatgaaggtagccatgtaaccttaggggtccagttagcaact
aaatataaagaaagtcgaattgttattaatgctattcattcgcaccatggggaagttcca
atggataatccgtactcaccattagtagccgctgctgatactttatcagctgctcgccct
ggtggtcgcaataataatgttgaaaattatattagtcggatgaaagagttggagcaaatg
tgtatggaagtccggggggtggccaaagcttatgccttacaagcaggtcgccaaattcgg
gtaattgttaatcccgaacggacaactgatattcaggcccaaaaaatagcctttgatatt
cgcgaaaaaattagtcataataaaatcgttcccggtgatattgttattacggtaattcgg
gaattacgctttattgaaaccgtaatttag

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